RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GRK7Q8WTQ7 553 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 ZUFSPQ96AP4 578 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 ZNF552Q9H707 407 aaPredicted RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 FBXO6Q9NRD1 293 aaPredicted RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 FAM114A2Q9NRY5 505 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 CUTCQ9NTM9 273 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 C20orf96Q9NUD7 363 aaPredicted RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 INTS10Q9NVR2 710 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 HEATR5BQ9P2D3 2071 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 FAM237BA0A1B0GVD1 139 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 A0A1B0GX78 115 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 ANKUB1A6NFN9 424 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 DSCR3O14972 297 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 SRPX2O60687 465 aaPredicted RBP11.88□□□□□ -0.51
SGCA-202ENST00000344627 SEMA7AO75326 666 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 USP1O94782 785 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 SYF2O95926 243 aaKnown RBP11.88□□□□□ -0.51
SGCA-202ENST00000344627 MLNP12872 115 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 MAGEA6P43360 314 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 OR1D4P47884 311 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 EIF2S3LQ2VIR3 472 aaKnown RBP11.88□□□□□ -0.51
SGCA-202ENST00000344627 TTLL9Q3SXZ7 439 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
SGCA-202ENST00000344627 SUSD1Q6UWL2 747 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 IGFL2Q6UWQ7 119 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 SHISA6Q6ZSJ9 500 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 CENPUQ71F23 418 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 OVCH1Q7RTY7 1134 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 SLC35F6Q8N357 371 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 RASGEF1CQ8N431 466 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 ST6GALNAC3Q8NDV1 305 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 MCUQ8NE86 351 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 OR2L3Q8NG85 312 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
SGCA-202ENST00000344627 YIPF2Q9BWQ6 316 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 TRMT1Q9NXH9 659 aaKnown RBP11.88□□□□□ -0.51
SGCA-202ENST00000344627 SPATA7Q9P0W8 599 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
SGCA-202ENST00000344627 ESPL1Q14674 2120 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 CNTRLQ7Z7A1 2325 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 ARHGEF33A8MVX0 844 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 MASP2O00187 686 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 ZSCAN12O43309 604 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 PRICKLE3O43900 615 aaPredicted RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 KIF5CO60282 957 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 CTSVO60911 334 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 PHF2O75151 1096 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 CNOT3O75175 753 aaKnown RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 MATN4O95460 622 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 LDLRP01130 860 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 FDXRP22570 491 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 ATP5DP30049 168 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 CARSP49589 748 aaKnown RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 ADARP55265 1226 aaKnown RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 CUL1Q13616 776 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 LONRF1Q17RB8 773 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 CRB2Q5IJ48 1285 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 AGAP7PQ5VUJ5 663 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 FRMPD2BQ6IN97 320 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 RPUSD3Q6P087 351 aaKnown RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 DENND6AQ8IWF6 608 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 CALML6Q8TD86 181 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 SMPDL3AQ92484 453 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 SERPINB12Q96P63 405 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 AGAP4Q96P64 663 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 OSBPL9Q96SU4 736 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 WDR77Q9BQA1 342 aaPredicted RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 DPH7Q9BTV6 452 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 SOX17Q9H6I2 414 aaPredicted RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 EPS8L2Q9H6S3 715 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 MRPS30Q9NP92 439 aaKnown RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 SEMA3GQ9NS98 782 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 SLC22A11Q9NSA0 550 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 STOX2Q9P2F5 926 aaPredicted RBP11.87□□□□□ -0.51
SGCA-202ENST00000344627 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
SGCA-202ENST00000344627 DOCK10Q96BY6 2186 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 LOC105369274A0A096LPK9 316 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 LOC102723532A0A0G2JNH3 316 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 A0A1W2PPV9 198 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 HYKKA2RU49 373 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 ZNF839A8K0R7 811 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 UMODP07911 640 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 ITGA3P26006 1051 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 TSFMP43897 325 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 GCGRP47871 477 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PNLIPRP1P54315 467 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 AP2B1P63010 937 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 YBX1P67809 324 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 NR6A1Q15406 480 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 CYP1B1Q16678 543 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms