RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TCRBV21S2A2A0A5A6 115 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 MAGEB17A8MXT2 336 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 LRATO95237 230 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 ETHE1O95571 254 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 HNF4AP41235 474 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 MUM1Q2TAK8 710 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 OR7G3Q8NG95 312 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 FAM3CQ92520 227 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 TMEM125Q96AQ2 219 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 RAD51AP1Q96B01 352 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 ZBTB18Q99592 522 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 APOOQ9BUR5 198 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 ITM2CQ9NQX7 267 aa21.69■■□□□ 1.06
PDLIM2-203ENST00000339162 H0Y8X5 98 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 H0YIV9 168 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 NVLO15381 856 aaKnown RBP21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 AMD1P17707 334 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 SDC1P18827 310 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 NANOGP8Q6NSW7 305 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 PRMT9Q6P2P2 845 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 DNASE1L2Q92874 299 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 PIF1Q9H611 641 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 NANOGQ9H9S0 305 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 CCDC177Q9NQR7 707 aaPredicted RBP21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 ASIC5Q9NY37 505 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 SUFUQ9UMX1 484 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 DYRK1BQ9Y463 629 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 GPSM3Q9Y4H4 160 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 KANSL1LA0AUZ9 987 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 SLC35G4P0C7Q5 338 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 CCINQ13939 588 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 LRIT3Q3SXY7 679 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 DLEU7Q6UYE1 221 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 DCUN1D3Q8IWE4 304 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 KBTBD2Q8IY47 623 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 HUS1BQ8NHY5 278 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 MAGEB10Q96LZ2 347 aaPredicted RBP21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 SPNS1Q9H2V7 528 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 UBE2ZQ9H832 354 aaPredicted RBP21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 PREBQ9HCU5 417 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 TMEM45AQ9NWC5 275 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 VPS29Q9UBQ0 182 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 FZD4Q9ULV1 537 aa21.68■■□□□ 1.06
PDLIM2-203ENST00000339162 TEAD1P28347 426 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 TPMTP51580 245 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 TAF11Q15544 211 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 LPCAT4Q643R3 524 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 NOXRED1Q6NXP6 359 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 OR5K2Q8NHB8 316 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 SLC13A3Q8WWT9 602 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 C1QTNF7Q9BXJ2 289 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 CLMPQ9H6B4 373 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 SCML1Q9UN30 329 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 USP22Q9UPT9 525 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 DNMT3AQ9Y6K1 912 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 PGRP06401 933 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 KELP23276 732 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 PRPH2P23942 346 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 SLBPQ14493 270 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 DNAJC14Q6Y2X3 702 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 Q6ZS52 159 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 HMGB4Q8WW32 186 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 RSRC1Q96IZ7 334 aaKnown RBP21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 ZNF570Q96NI8 536 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 SPATA6Q9NWH7 488 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 GPRC5BQ9NZH0 403 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 BCAP29Q9UHQ4 241 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 SLC17A4Q9Y2C5 497 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 PCDHGA11Q9Y5H2 935 aa21.67■■□□□ 1.06
PDLIM2-203ENST00000339162 B3GALT4O96024 378 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 FOXM1Q08050 763 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 SMAD4Q13485 552 aaKnown RBP21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 DPP10Q8N608 796 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 ZNF740Q8NDX6 193 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 C12orf66Q96MD2 445 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 INSM2Q96T92 566 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 GAS2L1Q99501 681 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 FGF22Q9HCT0 170 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 GEMIN8Q9NWZ8 242 aaKnown RBP21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 LRRC42Q9Y546 428 aa21.66■■□□□ 1.06
PDLIM2-203ENST00000339162 DYTNA2CJ06 578 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 GPR89AB7ZAQ6 455 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 GPR89BP0CG08 455 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 GABRG2P18507 467 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 MTPNP58546 118 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 CSTF3Q12996 717 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 SELPLGQ14242 412 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PYCR3Q53H96 274 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 EOGTQ5NDL2 527 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 MED27Q6P2C8 311 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 USP30Q70CQ3 517 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 DHFR2Q86XF0 187 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 GALNT13Q8IUC8 556 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 HOMEZQ8IX15 550 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 CDC26Q8NHZ8 85 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 SLC5A11Q8WWX8 675 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 DNAJC9Q8WXX5 260 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 BTBD1Q9H0C5 482 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 IMP3Q9NV31 184 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 SERTM1A2A2V5 107 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms