RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 ZNF630Q2M218 657 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-201ENST00000335508 TCTE1Q5JU00 501 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 DEPDC1Q5TB30 811 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 IRGCQ6NXR0 463 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 ADGRG6Q86SQ4 1221 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 THOC6Q86W42 341 aaKnown RBP6.68□□□□□ -1.34
SF3B1-201ENST00000335508 GALNT4Q8N4A0 578 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 OR4F6Q8NGB9 312 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 ZFPM2Q8WW38 1151 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 STON2Q8WXE9 905 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 FAM117AQ9C073 453 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 C12orf65Q9H3J6 166 aaKnown RBP6.68□□□□□ -1.34
SF3B1-201ENST00000335508 KRT84Q9NSB2 600 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 SEC14L3Q9UDX4 400 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 RAPGEFL1Q9UHV5 662 aa6.68□□□□□ -1.34
SF3B1-201ENST00000335508 A0A1W2PRB8 838 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 C5orf67F2Z3F1 127 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 MANBAO00462 879 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 WFS1O76024 890 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 PRLP01236 227 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 PGRP06401 933 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 JUPP14923 745 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 GLDCP23378 1020 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 OTUD1Q5VV17 481 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 GLYATQ6IB77 296 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 MSANTD1Q6ZTZ1 278 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 KLK6Q92876 244 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 SMAD5Q99717 465 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ARL8BQ9NVJ2 186 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 INTS6Q9UL03 887 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 MYH15Q9Y2K3 1946 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 DFNA5O60443 496 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 KLK3P07288 261 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 RPS17P08708 135 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 FGF3P11487 239 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 PAICSP22234 425 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 GTF2E2P29084 291 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ADRA1AP35348 466 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ARCN1P48444 511 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 FADDQ13158 208 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ZNF460Q14592 562 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 KIR2DS3Q14952 304 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ZNF678Q5SXM1 525 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 IZUMO2Q6UXV1 221 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 C1orf52Q8N6N3 182 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ACVR1CQ8NER5 493 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ADAMTS18Q8TE60 1221 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 SLC38A4Q969I6 547 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ZDHHC12Q96GR4 267 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 LMAN1LQ9HAT1 526 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 HRASLS2Q9NWW9 162 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 TAC3Q9UHF0 121 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CACNA1IQ9P0X4 2223 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CEP295Q9C0D2 2601 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 LOC730098B7Z3J9 87 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 B3GALT2O43825 422 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ENTPD5O75356 428 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 PREPP48147 710 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CLK1P49759 484 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CRISP3P54108 245 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 TAS2R50P59544 299 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 HMGCS1Q01581 520 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 LIPEQ05469 1076 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CCDC85BQ15834 202 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 C9orf50Q5SZB4 431 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 OTUD3Q5T2D3 398 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ZC3H14Q6PJT7 736 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 SPESP1Q6UW49 350 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 TMC8Q8IU68 726 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ISL2Q96A47 359 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 THAP11Q96EK4 314 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 RMND5BQ96G75 393 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 GPR174Q9BXC1 333 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 RHBGQ9H310 441 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 POT1Q9NUX5 634 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 AP1M2Q9Y6Q5 423 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 WASF2Q9Y6W5 498 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 MYH8P13535 1937 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ARID1BQ8NFD5 2236 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 THEGLP0DJG4 465 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 EPORP19235 508 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 GKP32189 559 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 GALNT18Q6P9A2 607 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CASP12Q6UXS9 341 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 TMEM26Q6ZUK4 368 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CD200R1Q8TD46 325 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 FAM170BA6NMN3 283 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 SDHDO14521 159 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 PDPK1O15530 556 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CYP7B1O75881 506 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 POU1F1P28069 291 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 CYP4F2P78329 520 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 NFKB2Q00653 900 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 TRAP1Q12931 704 aaKnown RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 OLIG2Q13516 323 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ZNF534Q76KX8 674 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 UBALD2Q8IYN6 164 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 RNF168Q8IYW5 571 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-201ENST00000335508 SPEM1Q8N4L4 309 aa6.67□□□□□ -1.34
SF3B1-201ENST00000335508 ATOH8Q96SQ7 321 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms