RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DPH7Q9BTV6 452 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 ANKMY1Q9P2S6 941 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 GPN3Q9UHW5 284 aaPredicted RBP26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 E7ENX8 843 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 CTSVO60911 334 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 C8GP07360 202 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 CD63P08962 238 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 TAP2Q03519 686 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 PDAP1Q13442 181 aaKnown RBP26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 GRM7Q14831 915 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 HECTD2Q5U5R9 776 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 YOD1Q5VVQ6 348 aaPredicted RBP26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 DUPD1Q68J44 220 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 FAM45BPQ6NSW5 357 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 TTC29Q8NA56 475 aaPredicted RBP26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 FAM45AQ8TCE6 357 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 ZNF285Q96NJ3 590 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 ENAMQ9NRM1 1142 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 UTP6Q9NYH9 597 aaKnown RBP26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 MOCS1Q9NZB8 636 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 TAC3Q9UHF0 121 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 VWA7Q9Y334 891 aa26.48■■□□□ 1.83
ATPAF1-201ENST00000329231 EIF3HO15372 352 aaKnown RBP eCLIP26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 ALAS2P22557 587 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 PRDX1Q06830 199 aaKnown RBP26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 SP140Q13342 867 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 MLIPQ5VWP3 458 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 ICE2Q659A1 982 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 PPFIBP2Q8ND30 876 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 PYROXD1Q8WU10 500 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 LINGO1Q96FE5 620 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 RAB17Q9H0T7 212 aa26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 IFT80Q9P2H3 777 aaPredicted RBP26.47■■□□□ 1.83
ATPAF1-201ENST00000329231 OR2A25A4D2G3 310 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 SLC16A5O15375 505 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 FDXRP22570 491 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 GCGRP47871 477 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 PMS2P54278 862 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 VSX2P58304 361 aaPredicted RBP26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 IL2P60568 153 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 NFKB2Q00653 900 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 NKAIN1Q4KMZ8 207 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 TTLL10Q6ZVT0 673 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 RNF44Q7L0R7 432 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 APLFQ8IW19 511 aaPredicted RBP26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 C9orf43Q8TAL5 461 aaPredicted RBP26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 CCDC138Q96M89 665 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 ZFYVE21Q9BQ24 234 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 PLCD4Q9BRC7 762 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 PARVBQ9HBI1 364 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 SLC6A20Q9NP91 592 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 NSMCE4AQ9NXX6 385 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 NDOR1Q9UHB4 597 aa26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 HEMK1Q9Y5R4 338 aaPredicted RBP26.46■■□□□ 1.83
ATPAF1-201ENST00000329231 A0A0J9YVX5 310 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 A0A1B0GX78 115 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 RFPL1O75677 317 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 IMPA1P29218 277 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 YBX1P67809 324 aaKnown RBP26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 ABATP80404 500 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 FAM214AQ32MH5 1076 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 WASHC2DQ5SRD0 308 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 THEMIS2Q5TEJ8 643 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 SLC26A11Q86WA9 606 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 LRRC56Q8IYG6 542 aaPredicted RBP26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 ADAMTS17Q8TE56 1095 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 ABHD17AQ96GS6 310 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 SAYSD1Q9NPB0 183 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 CUTCQ9NTM9 273 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 GRHL1Q9NZI5 618 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 ADAMTS6Q9UKP5 1117 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 PDE10AQ9Y233 779 aa26.45■■□□□ 1.82
ATPAF1-201ENST00000329231 FITM1A5D6W6 292 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 MKRN2OSH3BPM6 223 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 CAV1Q03135 178 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 FRMPD2BQ6IN97 320 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 STRA8Q7Z7C7 330 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 KIF18AQ8NI77 898 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 ABCF3Q9NUQ8 709 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 PSAT1Q9Y617 370 aa26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 FASNP49327 2511 aaKnown RBP26.44■■□□□ 1.82
ATPAF1-201ENST00000329231 DSCR3O14972 297 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 NRP2O60462 931 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 KLF7O75840 302 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 HIST1H2AGP0C0S8 130 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 ATXN8OSP0DMR3 200 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 PIM1P11309 404 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 HIST1H2ADP20671 130 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 ILF2Q12905 390 aaKnown RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 FAM69BQ5VUD6 431 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 FBXO42Q6P3S6 717 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 ZC3HC1Q86WB0 502 aaKnown RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 PAQR7Q86WK9 346 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 HIST1H2AHQ96KK5 128 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 OLFM1Q99784 485 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 HIST1H2AJQ99878 128 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 H2AFJQ9BTM1 129 aa26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 CCDC177Q9NQR7 707 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 STOX2Q9P2F5 926 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-201ENST00000329231 LOC105369274A0A096LPK9 316 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms