RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LDLRAP1Q5SW96 308 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 GCNT7Q6ZNI0 430 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ZBTB49Q6ZSB9 765 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 LRRC70Q7Z2Q7 622 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SYTL1Q8IYJ3 562 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ZNF786Q8N393 782 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 DTWD1Q8N5C7 304 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 FAM86B1Q8N7N1 296 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 TERB1Q8NA31 727 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 RNF145Q96MT1 663 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 OSBPL11Q9BXB4 747 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 NKX2-4Q9H2Z4 354 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 TM7SF3Q9NS93 570 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 CCM2LQ9NUG4 571 aaPredicted RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 STOX2Q9P2F5 926 aaPredicted RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 DKK3Q9UBP4 350 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PADI4Q9UM07 663 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SNX6Q9UNH7 406 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SH2B3Q9UQQ2 575 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PLXNA2O75051 1894 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 KCNE1BA0A087WTH5 132 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 KCNH1O95259 989 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 GBAP04062 536 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 MPC1LP0DKB6 136 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PSMD7P51665 324 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SEC13P55735 322 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PLOD1Q02809 727 aaPredicted RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 CBX3Q13185 183 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 DOC2AQ14183 400 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 COQ5Q5HYK3 327 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 FRG2Q64ET8 278 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PATL1Q86TB9 770 aaKnown RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 CARM1Q86X55 608 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 CBR4Q8N4T8 237 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 GPR156Q8NFN8 814 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SUSD6Q92537 303 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 BIRC7Q96CA5 298 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ZNF597Q96LX8 424 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 COQ10AQ96MF6 247 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 FRG2BQ96QU4 278 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 DYRK4Q9NR20 520 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PNPLA3Q9NST1 481 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 OLAHQ9NV23 265 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 DPP7Q9UHL4 492 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PPT2Q9UMR5 302 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ETHE1O95571 254 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 ENO2P09104 434 aaPredicted RBP12.04□□□□□ -0.48
RNF4-201ENST00000314289 GSTM1P09488 218 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 SDC1P18827 310 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 FCARP24071 287 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 IMPA1P29218 277 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 GJA4P35212 333 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 OPRD1P41143 372 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 CDKN2CP42773 168 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 PRLHRP49683 370 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 HNMTP50135 292 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 CCR3P51677 355 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
RNF4-201ENST00000314289 GSTM4Q03013 218 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 CNTN1Q12860 1018 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 PPP1R8Q12972 351 aaKnown RBP12.04□□□□□ -0.48
RNF4-201ENST00000314289 INPP5AQ14642 412 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 TCEA2Q15560 299 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 DUSP6Q16828 381 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 LCN8Q6JVE9 175 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 RTL10Q7L3V2 364 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 GPR141Q7Z602 305 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 ZNF547Q8IVP9 402 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 MSRB3Q8IXL7 192 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 WFIKKN2Q8TEU8 576 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 TSPEARQ8WU66 669 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 IL17FQ96PD4 163 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 ACAT2Q9BWD1 397 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 GPRC5BQ9NZH0 403 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 UTS2RQ9UKP6 389 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 OAZ3Q9UMX2 235 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 EDDM13A0A1B0GTR0 161 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
RNF4-201ENST00000314289 CLIC3O95833 236 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 IL10P22301 178 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 ITGB7P26010 798 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 ALDH3B2P48448 385 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 TXNL4AP83876 142 aaKnown RBP12.04□□□□□ -0.48
RNF4-201ENST00000314289 BNIP2Q12982 314 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 PWP1Q13610 501 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 KCTD21Q4G0X4 260 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 CATSPEREQ5SY80 951 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 EPHX4Q8IUS5 362 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 FBXO30Q8TB52 745 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 GIPC3Q8TF64 312 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 LGR4Q9BXB1 951 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 SOX17Q9H6I2 414 aaPredicted RBP12.04□□□□□ -0.48
RNF4-201ENST00000314289 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
RNF4-201ENST00000314289 SLC5A10A0PJK1 596 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 KPNA5O15131 536 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 PSIP1O75475 530 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms