RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 MAT2AP31153 395 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 POLR2LP62875 67 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CDC20Q12834 499 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CAPRIN1Q14444 709 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 MAPK11Q15759 364 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 RBM48Q5RL73 367 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 BRAT1Q6PJG6 821 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 USP43Q70EL4 1123 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CLIP4Q8N3C7 705 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 MINDY1Q8N5J2 469 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 BLOC1S5Q8TDH9 187 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 TOE1Q96GM8 510 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 UBXN10Q96LJ8 280 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 HOPXQ9BPY8 73 aaPredicted RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 BTBD2Q9BX70 525 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 DGCR6LQ9BY27 220 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ING2Q9H160 280 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 TP63Q9H3D4 680 aaPredicted RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 MAGEB16A2A368 324 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 PRR33A8MZF0 331 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 UPK3BL1B0FP48 263 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ANKRD66B4E2M5 251 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 UPK3BL2E5RIL1 263 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 INPP4BO15327 924 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 GPC4O75487 556 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 NDST3O95803 873 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CHEK2O96017 543 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 LDLRP01130 860 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CAPN3P20807 821 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ATP5F1P24539 256 aaPredicted RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 NMBRP28336 390 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 SERPINB1P30740 379 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 HNF1BP35680 557 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 GP2P55259 537 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 RAB10P61026 200 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ANGPT1Q15389 498 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ZIK1Q3SY52 487 aaPredicted RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 UGT3A2Q3SY77 523 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 USP39Q53GS9 565 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 LARP4Q71RC2 724 aaKnown RBP eCLIP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 GALNT13Q8IUC8 556 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ZCCHC7Q8N3Z6 543 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 AFAP1L2Q8N4X5 818 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 PIH1D2Q8WWB5 315 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 TADA1Q96BN2 335 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CLIP3Q96DZ5 547 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 LRFN3Q9BTN0 628 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 GPR174Q9BXC1 333 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 MRM3Q9HC36 420 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
VANGL1-201ENST00000310260 CPNE5Q9HCH3 593 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 PMF1-BGLAPU3KQ54 211 aa12.35□□□□□ -0.43
VANGL1-201ENST00000310260 A0A0J9YYE9 177 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 DEAF1O75398 565 aaPredicted RBP12.34□□□□□ -0.43
VANGL1-201ENST00000310260 GABARAPO95166 117 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 CHRM3P20309 590 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 GABARAPL2P60520 117 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 PIP5KL1Q5T9C9 394 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 AGBL4Q5VU57 503 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 KCTD11Q693B1 232 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ERAP2Q6P179 960 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 TSPAN33Q86UF1 283 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ARMC8Q8IUR7 673 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 TBC1D21Q8IYX1 336 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 NDNFQ8TB73 568 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■■ 54.9
VANGL1-201ENST00000310260 TP53INP1Q96A56 240 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 IER2Q9BTL4 223 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 HDAC8Q9BY41 377 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 BTBD1Q9H0C5 482 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ADNPQ9H2P0 1102 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ZNF229Q9UJW7 825 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 BAG5Q9UL15 447 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ANKRD36A6QL64 1941 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 NPIPB15A6NHN6 443 aaPredicted RBP12.34□□□□□ -0.43
VANGL1-201ENST00000310260 PSMD3O43242 534 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 MMP20O60882 483 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 NDUFS2O75306 463 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 STX1BP61266 288 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ILF2Q12905 390 aaKnown RBP12.34□□□□□ -0.43
VANGL1-201ENST00000310260 POU6F1Q14863 301 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 RANBP10Q6VN20 620 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 USP45Q70EL2 814 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 THAP5Q7Z6K1 395 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 HDAC2Q92769 488 aaKnown RBP12.34□□□□□ -0.43
VANGL1-201ENST00000310260 ECHDC3Q96DC8 303 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 PPP1R2P1Q96PQ5 205 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 TRIB3Q96RU7 358 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 MRPL57Q9BQC6 102 aaKnown RBP12.34□□□□□ -0.43
VANGL1-201ENST00000310260 CYP4F12Q9HCS2 524 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 NSMCE4AQ9NXX6 385 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 DKK3Q9UBP4 350 aa12.34□□□□□ -0.43
VANGL1-201ENST00000310260 B4GALT6Q9UBX8 382 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms