RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 A0A1B0GVC2 190 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 C2orf74A8MZ97 194 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TLX3O43711 291 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 LRCH4O75427 683 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 OR5F1O95221 314 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PDYNP01213 254 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 RPL17P18621 184 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ALAS2P22557 587 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ACTBP60709 375 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ACTG1P63261 375 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PPP2R2BQ00005 443 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 IL10RBQ08334 325 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 NFATC3Q12968 1075 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 INAVAQ3KP66 663 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF697Q5TEC3 545 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 GLYATQ6IB77 296 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 CES5AQ6NT32 575 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ARHGAP36Q6ZRI8 547 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 USP45Q70EL2 814 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 MRPL41Q8IXM3 137 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 C7orf61Q8IZ16 206 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 IL17RCQ8NAC3 791 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ING5Q8WYH8 240 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TFAP2CQ92754 450 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 KCNJ9Q92806 393 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 L3HYPDHQ96EM0 354 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 BORCS8Q96FH0 119 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 OR2M2Q96R28 347 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 DUSP16Q9BY84 665 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 GORASP2Q9H8Y8 452 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PREBQ9HCU5 417 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 FARSBQ9NSD9 589 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF639Q9UID6 485 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ENPP5Q9UJA9 477 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 MRPS33Q9Y291 106 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 KIF13AQ9H1H9 1805 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 CACNA1BQ00975 2339 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 FAM205CA6NFA0 338 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 C2CD4BA6NLJ0 364 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 DCDC2CA8MYV0 355 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 STK16O75716 305 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 METTL18O95568 372 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 CKMP06732 381 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TAZQ16635 292 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PRAMEF8Q5VWM4 474 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PRAMEF7Q5VXH5 474 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 HMBOX1Q6NT76 420 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 SLC2A7Q6PXP3 512 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 SPESP1Q6UW49 350 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 DCDC5Q6ZRR9 648 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 RNF180Q86T96 592 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 Q8N402 240 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 SMAP2Q8WU79 429 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 CLIP3Q96DZ5 547 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PGAP3Q96FM1 320 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 LENG8Q96PV6 779 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TCF25Q9BQ70 676 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PI4K2AQ9BTU6 479 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 HGH1Q9BTY7 390 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 C12orf10Q9HB07 376 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 MEPEQ9NQ76 525 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 A0A096LPI6 279 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 RCCD1A6NED2 376 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 NPIPA7E9PJI5 369 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ARPC2O15144 300 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 B3GALNT1O75752 331 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 KAT7O95251 611 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 CPSF4O95639 269 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 NPIPA8P0DM63 369 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TFPIP10646 304 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 VARSP26640 1264 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 FKBP1BP68106 108 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 MBTD1Q05BQ5 628 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PYDC2Q56P42 97 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 LLGL2Q6P1M3 1020 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 SATL1Q86VE3 508 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PTRH1Q86Y79 214 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 C12orf45Q8N5I9 185 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PTGR2Q8N8N7 351 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF563Q8TA94 476 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 SPPL2AQ8TCT8 520 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 OVCA2Q8WZ82 227 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 RNF31Q96EP0 1072 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF641Q96N77 438 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 OMDQ99983 421 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 CYTH4Q9UIA0 394 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ZFR2Q9UPR6 939 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 RNF6Q9Y252 685 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 COL14A1Q05707 1796 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TCRBV3S1A0A5B6 114 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PCDHGA12O60330 932 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 SC5DO75845 299 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ZBTB7AO95365 584 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 PIPP12273 146 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 TCEA1P23193 301 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 AVPR1AP37288 418 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ARCN1P48444 511 aaKnown RBP5.13□□□□□ -1.59
SCN1A-201ENST00000303395 EPHB3P54753 998 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ACTA2P62736 377 aa5.13□□□□□ -1.59
SCN1A-201ENST00000303395 ACTG2P63267 376 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms