RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TAP2Q03519 686 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 FOXM1Q08050 763 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 MAPKAPK3Q16644 382 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 SLC2A7Q6PXP3 512 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 MINDY1Q8N5J2 469 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 MSANTD3Q96H12 275 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 LRCH3Q96II8 777 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 EFCAB11Q9BUY7 163 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 PCDHAC1Q9H158 963 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 CARS2Q9HA77 564 aaKnown RBP14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 NMRK1Q9NWW6 199 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 PRAMEF4O60810 478 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 ACSL1P33121 698 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 PHEXP78562 749 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 ZNF33BQ06732 778 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 SLBPQ14493 270 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 PAGE3Q5JUK9 113 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 PRAMEF9Q5VWM5 478 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 SYT12Q8IV01 421 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 RNF175Q8N4F7 328 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 SLC5A11Q8WWX8 675 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 TMEM181Q9P2C4 612 aa14.04□□□□□ -0.16
SHCBP1-201ENST00000303383 C15orf38-AP3S2A0A0A6YYH1 394 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 PRORSD1PA6NEY8 169 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TPMTP51580 245 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CLNS1AP54105 237 aaKnown RBP14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CLDN2P57739 230 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 MS4A2Q01362 244 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CYP2A13Q16696 494 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TMEM31Q5JXX7 168 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 ENPP7Q6UWV6 458 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 ARPINQ7Z6K5 226 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 OR5K2Q8NHB8 316 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 APIPQ96GX9 242 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TIMM29Q9BSF4 260 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 HAUS8Q9BT25 410 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TRIM15Q9C019 465 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 C15orf41Q9Y2V0 281 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 XIRP2A4UGR9 3374 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 H0YIV9 168 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 NVLO15381 856 aaKnown RBP14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 BCAS2O75934 225 aaPredicted RBP14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 KCNH1O95259 989 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 IL6P05231 212 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 C1GALT1C1LP0DN25 315 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 HSD17B2P37059 387 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TDGQ13569 410 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TAF11Q15544 211 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TCEA2Q15560 299 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 PGS1Q32NB8 556 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CATSPEREQ5SY80 951 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 C1QTNF12Q5T7M4 302 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CYP2R1Q6VVX0 501 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 C17orf64Q86WR6 236 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 DHFR2Q86XF0 187 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 OR2T34Q8NGX1 318 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 SLC13A3Q8WWT9 602 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 EBPLQ9BY08 206 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 LRATO95237 230 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 SRFP11831 508 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 NPPBP16860 134 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CD22P20273 847 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 S100A3P33764 101 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 ZFP1Q6P2D0 407 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 SLCO4C1Q6ZQN7 724 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 TBC1D21Q8IYX1 336 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 KRTCAP2Q8N6L1 136 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 OR7G3Q8NG95 312 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 SETD7Q8WTS6 366 aaKnown RBP14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 GFM2Q969S9 779 aaKnown RBP14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 UBE2E3Q969T4 207 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 OR52E6Q96RD3 313 aa14.03□□□□□ -0.16
SHCBP1-201ENST00000303383 CEACAM5P06731 702 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 HSD3B1P14060 373 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 HSD3B2P26439 372 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 LAPTM5Q13571 262 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 USP39Q53GS9 565 aaKnown RBP14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 SPANXN4Q5MJ08 99 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 DUS1LQ6P1R4 473 aaKnown RBP14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 SLC15A3Q8IY34 581 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 KLHDC8AQ8IYD2 350 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 PPM1MQ96MI6 270 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 SGPP1Q9BX95 441 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 VCX3BQ9H321 246 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 EBF2Q9HAK2 575 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 ASIC5Q9NY37 505 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 RUVBL1Q9Y265 456 aaKnown RBP14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 DLGAP4Q9Y2H0 992 aa14.02□□□□□ -0.16
SHCBP1-201ENST00000303383 MAGEB17A8MXT2 336 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 NPPAP01160 153 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 PCSK2P16519 638 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 HNRNPA2B1P22626 353 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 NOXRED1Q6NXP6 359 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 ZNF852Q6ZMS4 543 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 PHACTR4Q8IZ21 702 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 KRT78Q8N1N4 520 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 GPR156Q8NFN8 814 aa14.02□□□□□ -0.17
SHCBP1-201ENST00000303383 HUS1BQ8NHY5 278 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms