RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 FCGRTP55899 365 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 ABRQ12979 859 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 USP39Q53GS9 565 aaKnown RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 ZNF691Q5VV52 312 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 TXNDC8Q6A555 127 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 SLC22A12Q96S37 553 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 P2RY12Q9H244 342 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 FBXO10Q9UK96 956 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 OARD1Q9Y530 152 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 PIKFYVEQ9Y2I7 2098 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 TRIM64A6NGJ6 449 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 EIF3FO00303 357 aaPredicted RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 HPRP00739 348 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 CHIT1Q13231 466 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 CXorf57Q6NSI4 855 aaKnown RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 B3GNT8Q7Z7M8 397 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 SLC22A16Q86VW1 577 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 MCFD2Q8NI22 146 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 FAR1Q8WVX9 515 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 MAL2Q969L2 176 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 MUL1Q969V5 352 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 COPS8Q99627 209 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 INTS6Q9UL03 887 aaKnown RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 SNX6Q9UNH7 406 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 TBX1O43435 398 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 FABP3P05413 133 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 EBLN1P0CF75 366 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 S100A1P23297 94 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 POU1F1P28069 291 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 TUFMP49411 452 aaKnown RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 DAPP51397 102 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 ACLYP53396 1101 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 FKBP1BP68106 108 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 CLCA4Q14CN2 919 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 DEFB128Q7Z7B8 93 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 DSG4Q86SJ6 1040 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 AUTS2Q8WXX7 1259 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 CAPNS2Q96L46 248 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 ALOXE3Q9BYJ1 711 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 CLMPQ9H6B4 373 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 RAPGEFL1Q9UHV5 662 aa12.3□□□□□ -0.44
LIG1-201ENST00000263274 SAMD4AQ9UPU9 718 aaKnown RBP12.3□□□□□ -0.44
LIG1-201ENST00000263274 GNG14A0A1W2PPG7 69 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 AREL1O15033 823 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 UGT2B11O75310 529 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 VNN2O95498 520 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 F11P03951 625 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 GBAP04062 536 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 PBLDP30039 288 aaPredicted RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 SERPINB1P30740 379 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 VLDLRP98155 873 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 DMC1Q14565 340 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 COLEC12Q5KU26 742 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SLC16A12Q6ZSM3 486 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 GPR149Q86SP6 731 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 BEND7Q8N7W2 519 aaPredicted RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 POC5Q8NA72 575 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 TPK1Q9H3S4 243 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 MAGEE1Q9HCI5 957 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 STARD7Q9NQZ5 370 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 M0R129 80 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SH3BP5O60239 455 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 PEX14O75381 377 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 CD160O95971 181 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 PPP3CCP48454 512 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 STK19P49842 368 aaPredicted RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 RFX4Q33E94 735 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 CPZQ66K79 652 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SLC44A2Q8IWA5 706 aaPredicted RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 PROX1Q92786 737 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 HSH2DQ96JZ2 352 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 ZNF641Q96N77 438 aaPredicted RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 WDR12Q9GZL7 423 aaKnown RBP12.29□□□□□ -0.44
LIG1-201ENST00000263274 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 ZDHHC6Q9H6R6 413 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SCN4AP35499 1836 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SULT1C4O75897 302 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 UGT2B4P06133 528 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 GALTP07902 379 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 NUDT7P0C024 238 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 GJA1P17302 382 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SDC1P18827 310 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 SPAM1P38567 509 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 OR1E2P47887 323 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 TPTEP56180 551 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 KIAA0040Q15053 153 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 CTF1Q16619 201 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 XKR6Q5GH73 641 aa12.29□□□□□ -0.44
LIG1-201ENST00000263274 ZNF648Q5T619 568 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms