RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 CPA2P48052 419 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CSRP3P50461 194 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 POLR2JP52435 117 aaKnown RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 RAB14P61106 215 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 MRPS21P82921 87 aaKnown RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 MYBPC3Q14896 1274 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ATG9BQ674R7 924 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 AMZ2Q86W34 360 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 RASGRP3Q8IV61 690 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 PGBD5Q8N414 524 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 OR2T12Q8NG77 320 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 NELL1Q92832 810 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TIMM29Q9BSF4 260 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 HDAC8Q9BY41 377 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CCNB1IP1Q9NPC3 277 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CLDND1Q9NY35 253 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 HCN3Q9P1Z3 774 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ARL5AQ9Y689 179 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 SMCHD1A6NHR9 2005 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 BUD23O43709 281 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PEX11AO75192 247 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 JUPP14923 745 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 BPIP17213 487 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 VARSP26640 1264 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 KCNJ5P48544 419 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CASP9P55211 416 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CCINQ13939 588 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CBX2Q14781 532 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PUS10Q3MIT2 529 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 RALGPS2Q86X27 583 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PLD6Q8N2A8 252 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ALG14Q96F25 216 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 MRTO4Q9UKD2 239 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ECDO95905 644 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ANPEPP15144 967 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CRATP43155 626 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 SLC7A2P52569 658 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 RHAGQ02094 409 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ZBTB49Q6ZSB9 765 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ZNF621Q6ZSS3 439 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 Q6ZVU0 165 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 NANOGNBQ7Z5D8 188 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 TMC8Q8IU68 726 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 BCL7CQ8WUZ0 217 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PIGKQ92643 395 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 MRPL38Q96DV4 380 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CENPNQ96H22 339 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CRISPLD1Q9H336 500 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 DIABLOQ9NR28 239 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ZNF358Q9NW07 568 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CALML5Q9NZT1 146 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CNOT3O75175 753 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CYP17A1P05093 508 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 EPHX1P07099 455 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 MMP2P08253 660 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 GIMD1P0DJR0 217 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 MMP12P39900 470 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 TIGD2Q4W5G0 525 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 DCP2Q8IU60 420 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 OR8H2Q8N162 312 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 LINC00471Q8N535 108 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 OR52L1Q8NGH7 329 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PMEPA1Q969W9 287 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 LMLNQ96KR4 655 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 WDR26Q9H7D7 661 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CCDC167Q9P0B6 97 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 IFT80Q9P2H3 777 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ZNF624Q9P2J8 865 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 COLEC10Q9Y6Z7 277 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 OTOFQ9HC10 1997 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 MANBAO00462 879 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 KIF1CO43896 1103 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 EPN2O95208 641 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 VIPP01282 170 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 DRD1P21728 446 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CHIT1Q13231 466 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ATP13A5Q4VNC0 1218 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PSAPL1Q6NUJ1 521 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 TTC33Q6PID6 262 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 AGTRAPQ6RW13 159 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 TAS1R1Q7RTX1 841 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 SVOPLQ8N434 492 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 YIPF3Q9GZM5 350 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 KLHL31Q9H511 634 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 NT5DC2Q9H857 520 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PLAC1Q9HBJ0 212 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 PREBQ9HCU5 417 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 DNAJC15Q9Y5T4 150 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CD70P32970 193 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 CASRP41180 1078 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 SLC25A3Q00325 362 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 MBOAT1Q6ZNC8 495 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 RASSF6Q6ZTQ3 369 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 Q6ZVL8 140 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
PTPN3-201ENST00000262539 ZNF786Q8N393 782 aa8.01□□□□□ -1.13
PTPN3-201ENST00000262539 POU5F2Q8N7G0 328 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms