RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 DPH7Q9BTV6 452 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 LRRC4CQ9HCJ2 640 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 SPATA7Q9P0W8 599 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 SAMD15Q9P1V8 674 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 FITM1A5D6W6 292 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 SOCS6O14544 535 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 SRPX2O60687 465 aaPredicted RBP18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 SEMA7AO75326 666 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 ONECUT2O95948 504 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 ALBP02768 609 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 ALPPP05187 535 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 PAMP19021 973 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 ADARP55265 1226 aaKnown RBP18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 CTBP1Q13363 440 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 FAM214AQ32MH5 1076 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 ANKRD20A4Q4UJ75 823 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 YOD1Q5VVQ6 348 aaPredicted RBP18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 ZNF470Q6ECI4 717 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 FBXO42Q6P3S6 717 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 PRSS58Q8IYP2 241 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 CISD2Q8N5K1 135 aaKnown RBP18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 SNRNP40Q96DI7 357 aaKnown RBP18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 WDR54Q9H977 334 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 FBXO6Q9NRD1 293 aaPredicted RBP18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 B3GNT3Q9Y2A9 372 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 HS3ST3B1Q9Y662 390 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 FAM169AQ9Y6X4 670 aa18.17■□□□□ 0.5
TM6SF1-201ENST00000258909 CTAGE9A4FU28 777 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 PSIP1O75475 530 aaKnown RBP18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 ATP5DP30049 168 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 CMPK1P30085 196 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 CUL1Q13616 776 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 KIRREL2Q6UWL6 708 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 RNF44Q7L0R7 432 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 REXO1L1PQ8IX06 675 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 RASGEF1CQ8N431 466 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 PPFIBP2Q8ND30 876 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 GIMAP7Q8NHV1 300 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 INPP5DQ92835 1189 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 SERPINB12Q96P63 405 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 PKP4Q99569 1192 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 SYNPO2LQ9H987 977 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 ABCF3Q9NUQ8 709 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 ASF1BQ9NVP2 202 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 KLK4Q9Y5K2 254 aa18.16■□□□□ 0.5
TM6SF1-201ENST00000258909 FAM237BA0A1B0GVD1 139 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 OR2A25A4D2G3 310 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 SDR42E2A6NKP2 422 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 USP1O94782 785 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 RNF224P0DH78 156 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 RPA3P35244 121 aaPredicted RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 COILP38432 576 aaPredicted RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 CLCN7P51798 805 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 SOX8P57073 446 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 AIMP2Q13155 320 aaKnown RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 THOC5Q13769 683 aaKnown RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 RBBP7Q16576 425 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 HIST2H2BCQ6DN03 193 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 IGFL3Q6UXB1 125 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 PARP9Q8IXQ6 854 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 IQCKQ8N0W5 287 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 AGGF1Q8N302 714 aaeCLIP18.15■□□□□ 0.54e-17■■■■■ 27.3
TM6SF1-201ENST00000258909 SMPDL3AQ92484 453 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 ILKAPQ9H0C8 392 aaPredicted RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 ZNF304Q9HCX3 659 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 MRPS30Q9NP92 439 aaKnown RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 ENAMQ9NRM1 1142 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 CSAG2Q9Y5P2 127 aa18.15■□□□□ 0.5
TM6SF1-201ENST00000258909 ZCWPW2A0A1B0GU75 182 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 H0YGG7 62 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 MYO1CO00159 1063 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 FFAR3O14843 346 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 GPR42O15529 346 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 KIF5CO60282 957 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 SYF2O95926 243 aaKnown RBP18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 ERGP11308 486 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 ARF3P61204 181 aaPredicted RBP18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 HIF1AQ16665 826 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 PRAMEF13Q5VWM6 474 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 ZNF549Q6P9A3 640 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 CCDC137Q6PK04 289 aaKnown RBP18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 ZADH2Q8N4Q0 377 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 PRR7Q8TB68 274 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 C10orf90Q96M02 699 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 ZFYVE21Q9BQ24 234 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 XAB2Q9HCS7 855 aaKnown RBP18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 TAC3Q9UHF0 121 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 MED16Q9Y2X0 877 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 NEU2Q9Y3R4 380 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 MAD1L1Q9Y6D9 718 aa18.14■□□□□ 0.5
TM6SF1-201ENST00000258909 IGKV1-8A0A0C4DH67 115 aa18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 MAGEB16A2A368 324 aa18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 VSTM2BA6NLU5 285 aa18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 IPO13O94829 963 aaKnown RBP18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 CATP04040 527 aaKnown RBP18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 ERVK-10P10266 1014 aa18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 MLNP12872 115 aa18.14■□□□□ 0.49
TM6SF1-201ENST00000258909 SLC1A2P43004 574 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms