RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 VBP1P61758 197 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 ARMC5Q96C12 935 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 TCF7L1Q9HCS4 588 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 ABCB9Q9NP78 766 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF446Q9NWS9 450 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 TCRBV21S2A2A0A5A6 115 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 UBAP1Q9NZ09 502 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 B4GALT6Q9UBX8 382 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 VEGFDO43915 354 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 CPNE3O75131 537 aaKnown RBP18.48■□□□□ 0.55
SMPD3-201ENST00000219334 SCRN3Q0VDG4 424 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 DNM1P34Q6PK57 102 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 OLFML1Q6UWY5 402 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 KCTD8Q6ZWB6 473 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 SLCO6A1Q86UG4 719 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 ZSCAN1Q8NBB4 408 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 TRIB2Q92519 343 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 TUBGCP5Q96RT8 1024 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 SGIP1Q9BQI5 828 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 A0A0X1KG70 313 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 DMPKQ09013 629 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 IL18R1Q13478 541 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 USP30Q70CQ3 517 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
SMPD3-201ENST00000219334 CBR4Q8N4T8 237 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 GRHL3Q8TE85 626 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 CDKN1CP49918 316 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-201ENST00000219334 RPL6Q02878 288 aaKnown RBP18.48■□□□□ 0.55
SMPD3-201ENST00000219334 KLHL22Q53GT1 634 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 ADGRD2Q7Z7M1 963 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 AMIGO1Q86WK6 493 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 BANPQ8N9N5 519 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 TMEM209Q96SK2 561 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 SLC29A3Q9BZD2 475 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 SPHK2Q9NRA0 654 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 FLRT1Q9NZU1 646 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 CAPN8A6NHC0 703 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 PRAMEF11O60813 436 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF20P17024 532 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 TMIGD1Q6UXZ0 262 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 SYVN1Q86TM6 617 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 CHERPQ8IWX8 916 aaKnown RBP18.48■□□□□ 0.55
SMPD3-201ENST00000219334 IFT46Q9NQC8 304 aa18.48■□□□□ 0.55
SMPD3-201ENST00000219334 DAPL1A0PJW8 107 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF879B4DU55 563 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 HMGN1P05114 100 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 SLC6A9P48067 706 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 RAB8AP61006 207 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 FAM214AQ32MH5 1076 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 GPRC6AQ5T6X5 926 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 CMTR2Q8IYT2 770 aaKnown RBP18.47■□□□□ 0.55
SMPD3-201ENST00000219334 FAM13CQ8NE31 585 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 NECTIN4Q96NY8 510 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 CHID1Q9BWS9 393 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 PSMD9O00233 223 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 AP3S2P59780 193 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 IRF9Q00978 393 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 NPY5RQ15761 445 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 PLEKHG6Q3KR16 790 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 PRRT3Q5FWE3 981 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 QSOX2Q6ZRP7 698 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 SERINC5Q86VE9 423 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 PNPLA2Q96AD5 504 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 DIRAS2Q96HU8 199 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 ARHGAP39Q9C0H5 1083 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 FAM240BA0A1B0GVZ2 78 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 RPS21P63220 83 aaKnown RBP18.47■□□□□ 0.55
SMPD3-201ENST00000219334 SLC5A11Q8WWX8 675 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 MR1Q95460 341 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 RAB7BQ96AH8 199 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF641Q96N77 438 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-201ENST00000219334 DNAJB4Q9UDY4 337 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 CYP1B1Q16678 543 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 KLHL26Q53HC5 615 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 FBXO46Q6PJ61 603 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-201ENST00000219334 AGTRAPQ6RW13 159 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF280BQ86YH2 543 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 TMEM139Q8IV31 216 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMPD3-201ENST00000219334 ZDHHC12Q96GR4 267 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 WDR12Q9GZL7 423 aaKnown RBP18.47■□□□□ 0.55
SMPD3-201ENST00000219334 PTGES2Q9H7Z7 377 aa18.47■□□□□ 0.55
SMPD3-201ENST00000219334 SEMA3AQ14563 771 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 PAFAH1B3Q15102 231 aaKnown RBP18.46■□□□□ 0.55
SMPD3-201ENST00000219334 PLET1Q6UQ28 207 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 CLDN19Q8N6F1 224 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 CENPMQ9NSP4 180 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ACSL5Q9ULC5 683 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 HYKKA2RU49 373 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 SIX3O95343 332 aaPredicted RBP18.46■□□□□ 0.55
SMPD3-201ENST00000219334 STATHP02808 62 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 SHMT2P34897 504 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 PREPP48147 710 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 C5orf22Q49AR2 442 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 CRB2Q5IJ48 1285 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ALG1LQ6GMV1 187 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 FAM43BQ6ZT52 329 aaPredicted RBP18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ZBTB46Q86UZ6 589 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 DHRS1Q96LJ7 313 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 CST11Q9H112 138 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms