RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 OR2L3Q8NG85 312 aa20.96■□□□□ 0.95
SCN1B-206ENST00000638536 MRRFQ96E11 262 aaKnown RBP20.96■□□□□ 0.95
SCN1B-206ENST00000638536 UNKQ9C0B0 810 aaKnown RBP20.96■□□□□ 0.95
SCN1B-206ENST00000638536 WISP3O95389 354 aaPredicted RBP20.95■□□□□ 0.94
SCN1B-206ENST00000638536 MSL3P1P0C860 447 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 STX2P32856 288 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 MANEAQ5SRI9 462 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 ARHGAP40Q5TG30 622 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 FIGLAQ6QHK4 219 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 SYTL1Q8IYJ3 562 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 SPATA6LQ8N4H0 392 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 RAB42Q8N4Z0 105 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 IL22RA1Q8N6P7 574 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 FCRL4Q96PJ5 515 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 GPR22Q99680 433 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 FAM129AQ9BZQ8 928 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 SPRTNQ9H040 489 aaPredicted RBP20.95■□□□□ 0.94
SCN1B-206ENST00000638536 PARVBQ9HBI1 364 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 ABCF3Q9NUQ8 709 aa20.95■□□□□ 0.94
SCN1B-206ENST00000638536 PHGDHO43175 533 aaKnown RBP20.94■□□□□ 0.94
SCN1B-206ENST00000638536 SCRG1O75711 98 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 C8GP07360 202 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 LIFP15018 202 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 F8A1P23610 371 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 ARHGAP19Q14CB8 494 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 BROXQ5VW32 411 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 LRRC8EQ6NSJ5 796 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 TMEM126BQ8IUX1 230 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 SMPDL3AQ92484 453 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 PDLIM5Q96HC4 596 aaKnown RBP20.94■□□□□ 0.94
SCN1B-206ENST00000638536 CHRNA10Q9GZZ6 450 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 SLC6A20Q9NP91 592 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 STOX2Q9P2F5 926 aaPredicted RBP20.94■□□□□ 0.94
SCN1B-206ENST00000638536 TXNDC16Q9P2K2 825 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 TAC3Q9UHF0 121 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 LHX6Q9UPM6 363 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 PIEZO2Q9H5I5 2752 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 ATRXP46100 2492 aa20.94■□□□□ 0.94
SCN1B-206ENST00000638536 IGKV1-8A0A0C4DH67 115 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 CDC7O00311 574 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 CTSVO60911 334 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 ACSL3O95573 720 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 POU4F1Q01851 419 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 FAM199XQ6PEV8 388 aaPredicted RBP20.93■□□□□ 0.94
SCN1B-206ENST00000638536 SBSNQ6UWP8 590 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 C6orf15Q6UXA7 325 aaPredicted RBP20.93■□□□□ 0.94
SCN1B-206ENST00000638536 CCDC81Q6ZN84 652 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 BPHLQ86WA6 291 aaPredicted RBP20.93■□□□□ 0.94
SCN1B-206ENST00000638536 MCOLN3Q8TDD5 553 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 GPAMQ9HCL2 828 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 IL17BQ9UHF5 180 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 HMX2A2RU54 273 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 K7ENP7 123 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 FAM153BP0C7A2 387 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 CYP2A7P20853 494 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 TMPRSS3P57727 454 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 GPS2Q13227 327 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 USP10Q14694 798 aaKnown RBP20.93■□□□□ 0.94
SCN1B-206ENST00000638536 FAM153CQ494X1 144 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 GRTP1Q5TC63 336 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 LCN10Q6JVE6 187 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 INO80CQ6PI98 192 aaPredicted RBP20.93■□□□□ 0.94
SCN1B-206ENST00000638536 IFT20Q8IY31 132 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 GSPT2Q8IYD1 628 aaKnown RBP20.93■□□□□ 0.94
SCN1B-206ENST00000638536 ATG10Q9H0Y0 220 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 SYNPO2LQ9H987 977 aa20.93■□□□□ 0.94
SCN1B-206ENST00000638536 NPEPPSL1A6NEC2 478 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 SLC16A5O15375 505 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 ZNF500O60304 480 aaPredicted RBP20.92■□□□□ 0.94
SCN1B-206ENST00000638536 RPA3P35244 121 aaPredicted RBP20.92■□□□□ 0.94
SCN1B-206ENST00000638536 STAT5AP42229 794 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 ATP1A2P50993 1020 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 SP140Q13342 867 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 PPP1R3AQ16821 1122 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 CYB5D1Q6P9G0 228 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 CMC1Q7Z7K0 106 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 ESX1Q8N693 406 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 OR8K5Q8NH50 307 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 UHMK1Q8TAS1 419 aaKnown RBP20.92■□□□□ 0.94
SCN1B-206ENST00000638536 CCDC138Q96M89 665 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 RUFY1Q96T51 708 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 DPH7Q9BTV6 452 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 FANCEQ9HB96 536 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 SYTL2Q9HCH5 934 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 UTP6Q9NYH9 597 aaKnown RBP20.92■□□□□ 0.94
SCN1B-206ENST00000638536 EURLQ9NYK6 297 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 SERTAD3Q9UJW9 196 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 SH2B3Q9UQQ2 575 aa20.92■□□□□ 0.94
SCN1B-206ENST00000638536 MRPS18BQ9Y676 258 aaKnown RBP20.92■□□□□ 0.94
SCN1B-206ENST00000638536 BSNQ9UPA5 3926 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 MAP3K7O43318 606 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 ZNF749O43361 778 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 GUCA1CO95843 209 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 SPRP35270 261 aaPredicted RBP20.91■□□□□ 0.94
SCN1B-206ENST00000638536 HSD17B2P37059 387 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 ITGA1P56199 1179 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 CYP4F2P78329 520 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 VAC14Q08AM6 782 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 ABHD18Q0P651 414 aa20.91■□□□□ 0.94
SCN1B-206ENST00000638536 MAP7Q14244 749 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms