RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 CYTH2Q99418 400 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 MIPEPQ99797 713 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 HIST1H2AJQ99878 128 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 H2AFJQ9BTM1 129 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 ACAT2Q9BWD1 397 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 TRIM54Q9BYV2 358 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 CHRNA10Q9GZZ6 450 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 ACSS3Q9H6R3 686 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 PARVBQ9HBI1 364 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 FAM60AQ9NP50 221 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 CCDC177Q9NQR7 707 aaPredicted RBP8.88□□□□□ -0.99
NELFE-214ENST00000625905 ABCF3Q9NUQ8 709 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 ARL15Q9NXU5 204 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 STOX2Q9P2F5 926 aaPredicted RBP8.88□□□□□ -0.99
NELFE-214ENST00000625905 TAC3Q9UHF0 121 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 PILRAQ9UKJ1 303 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 PDE10AQ9Y233 779 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 KLHL20Q9Y2M5 609 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 MTO1Q9Y2Z2 717 aaKnown RBP8.88□□□□□ -0.99
NELFE-214ENST00000625905 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
NELFE-214ENST00000625905 SNRNP200O75643 2136 aaKnown RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 CACNA1BQ00975 2339 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 TEX51A0A1B0GUA7 166 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 E7ENX8 843 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 E7EQ34 232 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 PRICKLE3O43900 615 aaPredicted RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 FAM155BO75949 473 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 OR2B3O76000 313 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 MT-ND3P03897 115 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 INHBAP08476 426 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 AP1S2P56377 157 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 RAB10P61026 200 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 CXADRP78310 365 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 TAP2Q03519 686 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 ZKSCAN8Q15776 578 aaPredicted RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 UBAP2Q5T6F2 1119 aaKnown RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 PRAMEF13Q5VWM6 474 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 KIAA1614Q5VZ46 1190 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 TMEM207Q6UWW9 146 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 C6orf15Q6UXA7 325 aaPredicted RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 CCDC81Q6ZN84 652 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 RAPH1Q70E73 1250 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 FRA10AC1Q70Z53 315 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 TAOK1Q7L7X3 1001 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 ADAMTSL2Q86TH1 951 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 GSPT2Q8IYD1 628 aaKnown RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 OR2A1Q8NGT9 310 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 OR1L3Q8NH93 324 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 DLG3Q92796 817 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 NKD1Q969G9 470 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 PDLIM5Q96HC4 596 aaKnown RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 CCDC138Q96M89 665 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 SLC7A5P2Q9GIP4 190 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 GPN2Q9H9Y4 310 aaPredicted RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 MRPS30Q9NP92 439 aaKnown RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 UTP6Q9NYH9 597 aaKnown RBP8.87□□□□□ -0.99
NELFE-214ENST00000625905 ANKMY1Q9P2S6 941 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 CTNNAL1Q9UBT7 734 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 SERTAD3Q9UJW9 196 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 PLCL2Q9UPR0 1127 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 IKBKGQ9Y6K9 419 aa8.87□□□□□ -0.99
NELFE-214ENST00000625905 A0A087WUV0 522 aaPredicted RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 CDC7O00311 574 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ZSCAN9O15535 394 aaPredicted RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 WISP3O95389 354 aaPredicted RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 GUCA1CO95843 209 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 NTRK1P04629 796 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 CCNYL3P0C7X3 344 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 LIFP15018 202 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 CCND1P24385 295 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 STAT5AP42229 794 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 GRIA3P42263 894 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 SERPINB8P50452 374 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ABATP80404 500 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ABHD18Q0P651 414 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 SRSF6Q13247 344 aaKnown RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 BMPR2Q13873 1038 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 TSNQ15631 228 aaKnown RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 ZC3H12BQ5HYM0 836 aaKnown RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 ICE2Q659A1 982 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 FCRL6Q6DN72 434 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 CAPN13Q6MZZ7 669 aaPredicted RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 FIGLAQ6QHK4 219 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 AGTRAPQ6RW13 159 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 SBSNQ6UWP8 590 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 TIPARPQ7Z3E1 657 aaKnown RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 ADCK2Q7Z695 626 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 CMC1Q7Z7K0 106 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 TBC1D1Q86TI0 1168 aaPredicted RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 DNAJC22Q8N4W6 341 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ANKRD49Q8WVL7 239 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ATL1Q8WXF7 558 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ANKRD7Q92527 254 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
NELFE-214ENST00000625905 CLIP3Q96DZ5 547 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 CRELD1Q96HD1 420 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 PAFAH2Q99487 392 aa8.86□□□□□ -0.99
NELFE-214ENST00000625905 DPH7Q9BTV6 452 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms