RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RAB10P61026 200 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 MC1RQ01726 317 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 PLOD1Q02809 727 aaPredicted RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 ILF2Q12905 390 aaKnown RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 DLG1Q12959 904 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 PRKAA1Q13131 559 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 ZNF658BQ4V348 819 aaPredicted RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 C6orf15Q6UXA7 325 aaPredicted RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 PPP1R3BQ86XI6 285 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 PLD6Q8N2A8 252 aaKnown RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 CLDN19Q8N6F1 224 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 SIDT2Q8NBJ9 832 aaKnown RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 RMDN2Q96LZ7 410 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 ULBP3Q9BZM4 244 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 OR52A5Q9H2C5 316 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 MVB12BQ9H7P6 319 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 GPN2Q9H9Y4 310 aaPredicted RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 ZNF358Q9NW07 568 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.26□□□□□ -0.45
PNKP-217ENST00000625216 FAM8A1Q9UBU6 413 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 EMCNQ9ULC0 261 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
PNKP-217ENST00000625216 OR6C74A6NCV1 312 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 LIN7AO14910 233 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 PFDN6O15212 129 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 ZBTB11O95625 1053 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 FTH1P02794 183 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 ETV4P43268 484 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 SLC18A1P54219 525 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 ADARP55265 1226 aaKnown RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 SH3BP2P78314 561 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 HSD11B2P80365 405 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 CBX1P83916 185 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 LY6DQ14210 128 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 TBR1Q16650 682 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 LINC00303Q3SY05 128 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 CRTC2Q53ET0 693 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 TMEM207Q6UWW9 146 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 RAPH1Q70E73 1250 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 ZNF605Q86T29 641 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 RASGRP3Q8IV61 690 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 CENPLQ8N0S6 344 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 LILRA3Q8N6C8 439 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 GIMAP7Q8NHV1 300 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 KCTD4Q8WVF5 259 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 TFGQ92734 400 aaPredicted RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 EXTL1Q92935 676 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 TSPAN17Q96FV3 270 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 CABS1Q96KC9 395 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 FAM111AQ96PZ2 611 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 FERD3LQ96RJ6 166 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 SLC30A3Q99726 388 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 TFB2MQ9H5Q4 396 aaKnown RBP12.25□□□□□ -0.45
PNKP-217ENST00000625216 NKIRAS1Q9NYS0 192 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 GALPQ9UBC7 116 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 RARRES3Q9UL19 164 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 GRID1Q9ULK0 1009 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 VWA7Q9Y334 891 aa12.25□□□□□ -0.45
PNKP-217ENST00000625216 LOC101059948A0A1B0GTJ6 334 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 IQCF5A8MTL0 148 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 TM9SF1O15321 606 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 ZWINTO95229 277 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 ESR1P03372 595 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 OR56A5P0C7T3 313 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 CCNYL3P0C7X3 344 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 DHRS4L1P0CG22 281 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 CRABP2P29373 138 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 CRHR1P34998 444 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 MDH1P40925 334 aaKnown RBP12.24□□□□□ -0.45
PNKP-217ENST00000625216 STAT5AP42229 794 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 SLC12A2P55011 1212 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 TMTC4Q5T4D3 741 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 DUS1LQ6P1R4 473 aaKnown RBP12.24□□□□□ -0.45
PNKP-217ENST00000625216 C16orf46Q6P387 395 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 D2HGDHQ8N465 521 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 EXD3Q8N9H8 876 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 OR4E2Q8NGC2 313 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 OR8K5Q8NH50 307 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 ANKRD49Q8WVL7 239 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 LCN9Q8WX39 176 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 FAM136AQ96C01 138 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 GPR21Q99679 349 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 CCDC68Q9H2F9 335 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 SRMSQ9H3Y6 488 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 POPDC3Q9HBV1 291 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 SYTL2Q9HCH5 934 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 C1GALT1Q9NS00 363 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 INTS9Q9NV88 658 aaKnown RBP12.24□□□□□ -0.45
PNKP-217ENST00000625216 TMEM216Q9P0N5 145 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 GNPTGQ9UJJ9 305 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 ADAM21Q9UKJ8 722 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 PADI1Q9ULC6 663 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 PLLPQ9Y342 182 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 CFAP46Q8IYW2 2715 aa12.24□□□□□ -0.45
PNKP-217ENST00000625216 A0A087X1B8 175 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 B8ZZF3 427 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms