RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PAK4O96013 591 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 AMD1P17707 334 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SDC1P18827 310 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 PWP1Q13610 501 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SELPLGQ14242 412 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 IRF4Q15306 451 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 TMEM196Q5HYL7 178 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 ADNP2Q6IQ32 1131 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 AMZ2Q86W34 360 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SPPL2CQ8IUH8 684 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 GLB1L3Q8NCI6 653 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 N4BP2L2Q92802 583 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 NEIL2Q969S2 332 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZUFSPQ96AP4 578 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 CGREF1Q99674 301 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SH2B3Q9UQQ2 575 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 NEUROG3Q9Y4Z2 214 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SERTM1A2A2V5 107 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 ARPC2O15144 300 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 PGRP06401 933 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 NTSR1P30989 418 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 CTHP32929 405 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 CCR3P51677 355 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 EEFSECP57772 596 aaKnown RBP16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 MTPNP58546 118 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 PLOD1Q02809 727 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SPATS1Q496A3 300 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 ANO7Q6IWH7 933 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 LRRTM4Q86VH4 590 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 RALGPS2Q86X27 583 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 GALNT13Q8IUC8 556 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 FAM110BQ8TC76 370 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 GTF2H4Q92759 462 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 SGK2Q9HBY8 427 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 FBXL12Q9NXK8 326 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 DTNAQ9Y4J8 743 aa16.8■□□□□ 0.28
PCDHGC3-205ENST00000617641 C15orf38-AP3S2A0A0A6YYH1 394 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 NPIPB8E9PQR5 432 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 EGFP01133 1207 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 MTHFD1P11586 935 aaKnown RBP16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 PRPS2P11908 318 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 SLC7A1P30825 629 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 HNF4AP41235 474 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 CSTF3Q12996 717 aaKnown RBP16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 MAPKAPK3Q16644 382 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 CAPN13Q6MZZ7 669 aaPredicted RBP16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 ARPINQ7Z6K5 226 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 TMPRSS11BQ86T26 416 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 TMEM102Q8N9M5 508 aaPredicted RBP16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 PHC3Q8NDX5 983 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 CANT1Q8WVQ1 401 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 DUS3LQ96G46 650 aaKnown RBP16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 EBPLQ9BY08 206 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 OSBPL6Q9BZF3 934 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZNF576Q9H609 170 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 ACTR3BQ9P1U1 418 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 ASF1AQ9Y294 204 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 KCNE2Q9Y6J6 123 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 H0YIV9 168 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 PEX1O43933 1283 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 DFNA5O60443 496 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 ADAM23O75077 832 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 KCNH1O95259 989 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 IL6P05231 212 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 NCK1P16333 377 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 CLDN8P56748 225 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 LCN8Q6JVE9 175 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 NOXRED1Q6NXP6 359 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 SLCO4C1Q6ZQN7 724 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 PDZD3Q86UT5 571 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 IL17RCQ8NAC3 791 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR5AR1Q8NGP9 310 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR14C36Q8NHC7 312 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 LRTOMTQ8WZ04 291 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 EGLN2Q96KS0 407 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR52E6Q96RD3 313 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 TEX101Q9BY14 249 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 TRIM15Q9C019 465 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 WDR26Q9H7D7 661 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 PLAGL1Q9UM63 463 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 TMED5Q9Y3A6 229 aa16.79■□□□□ 0.28
PCDHGC3-205ENST00000617641 ANHXE9PGG2 379 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 SH3BGRLO75368 114 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 LRATO95237 230 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PCNAP12004 261 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 NPPBP16860 134 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 MAPK1P28482 360 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 CLNS1AP54105 237 aaKnown RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PHC1P78364 1004 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 TAP2Q03519 686 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PCDH1Q08174 1060 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 AGERQ15109 404 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PON2Q15165 354 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 DNAJC14Q6Y2X3 702 aaPredicted RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 TP53I13Q8NBR0 393 aaPredicted RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 ABHD8Q96I13 439 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms