RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MAELQ96JY0 434 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 MTERF1Q99551 399 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 TRMOQ9BU70 441 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 IL23AQ9NPF7 189 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 ARMC1Q9NVT9 282 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 BAG5Q9UL15 447 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 SLC22A14Q9Y267 594 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 OAS3Q9Y6K5 1087 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 U3KQV3 271 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 FAM47E-STBD1D6RA91 191 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 E2F3O00716 465 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 ACOX3O15254 700 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 GRM6O15303 877 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 LDLRP01130 860 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 DNAJB1P25685 340 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 POLR2JP52435 117 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 TMBIM6P55061 237 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 GTDC1Q4AE62 458 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 Q6ZSR9 355 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 UBE2R2Q712K3 238 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 ANKRD33Q7Z3H0 272 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 GALNT10Q86SR1 603 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 FAM124AQ86V42 546 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 ADGRG5Q8IZF4 528 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 GPR150Q8NGU9 434 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 ADAMTS16Q8TE57 1224 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 ALG14Q96F25 216 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 KCTD14Q9BQ13 255 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 PCDHGA3Q9Y5H0 932 aa14.11□□□□□ -0.15
SHROOM1-208ENST00000617339 TMEM202A6NGA9 273 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 INMTO95050 263 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 IL12AP29459 219 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 SPAM1P38567 509 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 IST1P53990 364 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 LIPEQ05469 1076 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 ADCK2Q7Z695 626 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 KCNJ9Q92806 393 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 RAD9AQ99638 391 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 CMTM6Q9NX76 183 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 DHRS7Q9Y394 339 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 OR51B4Q9Y5P0 310 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 H0Y858 1186 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 ULK1O75385 1050 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 WDR47O94967 919 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 KCNC4Q03721 635 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 LAPTM5Q13571 262 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 GRIN2CQ14957 1233 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 FAM174BQ3ZCQ3 159 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 INO80DQ53TQ3 878 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 ANKRD34AQ69YU3 496 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 ANKRD13BQ86YJ7 626 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 SH3KBP1Q96B97 665 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 NOBOXO60393 691 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 HTR1BP28222 390 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 PTSQ03393 145 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 SELPLGQ14242 412 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 PPP2R2DQ66LE6 453 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 C22orf39Q6P5X5 142 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 SZRD1Q7Z422 152 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 SNX20Q7Z614 316 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 EGLN2Q96KS0 407 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 NRTNQ99748 197 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 RIOK2Q9BVS4 552 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 TMEM9Q9P0T7 183 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 DNMT3BQ9UBC3 853 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
SHROOM1-208ENST00000617339 EFCAB14O75071 495 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 UROSP10746 265 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 AGXTP21549 392 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 CCR7P32248 378 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SEC13P55735 322 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 STARD3Q14849 445 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 ZNF284Q2VY69 593 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 PYCR3Q53H96 274 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SBSNQ6UWP8 590 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 GCNT7Q6ZNI0 430 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 TRAPPC5Q8IUR0 188 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 TRPV3Q8NET8 790 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 GPR156Q8NFN8 814 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 NDNFQ8TB73 568 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SELENOMQ8WWX9 145 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 AASSQ9UDR5 926 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 CFAP20Q9Y6A4 193 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SAP18O00422 153 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 GSTA4O15217 222 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 DGKAP23743 735 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 VBP1P61758 197 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 AP1S1P61966 158 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SLC14A2Q15849 920 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 KANK2Q63ZY3 851 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 USP45Q70EL2 814 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 PACRGLQ8N7B6 248 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 RHEBL1Q8TAI7 183 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 CLIP3Q96DZ5 547 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 APOLD1Q96LR9 279 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 TP63Q9H3D4 680 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 MAGEE1Q9HCI5 957 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SNX5Q9Y5X3 404 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 GREM1O60565 184 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms