RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SYNGAP1Q96PV0 1343 aa4.62□□□□□ -1.67
LINC01109-201ENST00000603837 RNF103-CHMP3A0A140T963 221 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 FAM92AA1XBS5 289 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SAGE2PA6NJ88 616 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TRAF5O00463 557 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 CHMP2AO43633 222 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TGFAP01135 160 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 CHRNB2P17787 502 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 AOC1P19801 751 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 KCNA5P22460 613 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 IL12AP29459 219 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ATP5C1P36542 298 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 COILP38432 576 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SERPINB10P48595 397 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ACTR2P61160 394 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SLC18A2Q05940 514 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 FOXM1Q08050 763 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 KRR1Q13601 381 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 FLOT2Q14254 428 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 PIGHQ14442 188 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF273Q14593 569 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 MORF4L2Q15014 288 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 PRKD1Q15139 912 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TOR1AIP1Q5JTV8 583 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TIGD7Q6NT04 549 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 C5orf46Q6UWT4 87 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 LIPIQ6XZB0 460 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 RNF207Q6ZRF8 634 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ARCQ7LC44 396 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF551Q7Z340 670 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 DPP10Q8N608 796 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TMEM102Q8N9M5 508 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SLC37A3Q8NCC5 494 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 BPIFB6Q8NFQ5 453 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SLC20A1Q8WUM9 679 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ING5Q8WYH8 240 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 RIT1Q92963 219 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 MR1Q95460 341 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZDHHC12Q96GR4 267 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 C9orf72Q96LT7 481 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 QRFPRQ96P65 431 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZC3H12CQ9C0D7 883 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 QRSL1Q9H0R6 528 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 COG4Q9H9E3 785 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 EFCAB1Q9HAE3 211 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SEPSECSQ9HD40 501 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 COA4Q9NYJ1 87 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ITGA11Q9UKX5 1188 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 MN1Q10571 1320 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 A0A0A6YYK5 440 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 PRSS51A0A1B0GVH4 220 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 A0A1W2PPM1 405 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 A0A1W2PQH9 124 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 LINC00862A6NCI5 91 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 A8MXE2 369 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ADAMTS3O15072 1205 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SLC22A2O15244 555 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 B4GAT1O43505 415 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TADA2AO75478 443 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TOM1L1O75674 476 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 RHOBTB1O94844 696 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 VAMP5O95183 116 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 RAB3DO95716 219 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 WDPCPO95876 746 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 LGI1O95970 557 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 APOA1P02647 267 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 IL6P05231 212 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 CDK1P06493 297 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 SERPINA6P08185 405 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 CSF1P09603 554 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 H2AFZP0C0S5 128 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF888P0CJ79 500 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 PLS3P13797 630 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 NID1P14543 1247 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 HK1P19367 917 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 BGNP21810 368 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 HNRNPA2B1P22626 353 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 HMGCLP35914 325 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 KCNC1P48547 511 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 CAPZA1P52907 286 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 PER3P56645 1201 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TSPAN5P62079 268 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 YWHAEP62258 255 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 INCA1Q0VD86 236 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 CAMK2GQ13555 558 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 KCNJ11Q14654 390 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 GPR68Q15743 365 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF181Q2M3W8 571 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ZBTB37Q5TC79 503 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 RNLSQ5VYX0 342 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 DARS2Q6PI48 645 aaKnown RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 RHBDF2Q6PJF5 856 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 FAM111BQ6SJ93 734 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 MFSD7Q6UXD7 560 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 H2AFVQ71UI9 128 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 H1FNTQ75WM6 255 aaPredicted RBP4.61□□□□□ -1.67
LINC01109-201ENST00000603837 C16orf62Q7Z3J2 963 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 ANKS1BQ7Z6G8 1248 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 TDRPQ86YL5 185 aa4.61□□□□□ -1.67
LINC01109-201ENST00000603837 LGI2Q8N0V4 545 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms