RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 IMP3Q9NV31 184 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 GIMAP2Q9UG22 337 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 PCOLCE2Q9UKZ9 415 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 CCL27Q9Y4X3 112 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SPTY2D1-AS1A0A0U1RR47 76 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 LOC100653049A0A140TA62 436 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 AXIN1O15169 862 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 GYG2O15488 501 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 KRT34O76011 436 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 IDO1P14902 403 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 NQO1P15559 274 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 CPA2P48052 419 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 CYLC2Q14093 348 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 E2F2Q14209 437 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SGO1Q5FBB7 561 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 GRHL2Q6ISB3 625 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 LCTLQ6UWM7 567 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 KIF2BQ8N4N8 673 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SELENOMQ8WWX9 145 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SPACA7Q96KW9 195 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 IL17FQ96PD4 163 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 HAUS8Q9BT25 410 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 TMEM168Q9H0V1 697 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 C1orf21Q9H246 121 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 CD320Q9NPF0 282 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 AASDHPPTQ9NRN7 309 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 FARSBQ9NSD9 589 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 PNMA8BQ9ULN7 279 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 PLAGL1Q9UM63 463 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 INVSQ9Y283 1065 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 COLEC10Q9Y6Z7 277 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 K7ESF4 209 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 LSM1O15116 133 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 MTHFD1P11586 935 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 MRPL19P49406 292 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 ACADVLP49748 655 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 EMX2Q04743 252 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 GRIK2Q13002 908 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 TSTA3Q13630 321 aaPredicted RBP17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 NR6A1Q15406 480 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 MAPRE2Q15555 327 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 USP39Q53GS9 565 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 FRG2Q64ET8 278 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 SLCO4C1Q6ZQN7 724 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 SMPDL3AQ92484 453 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 NEIL2Q969S2 332 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 WDR34Q96EX3 536 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 FRG2BQ96QU4 278 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 MENTQ9BUN1 341 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 RAB11FIP5Q9BXF6 653 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 PCBD2Q9H0N5 130 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 EHD1Q9H4M9 534 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 TBC1D29Q9UFV1 150 aa17.08■□□□□ 0.33
SHKBP1-224ENST00000600718 H0YIV9 168 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 KDM1AO60341 852 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 PDYNP01213 254 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 GPX3P22352 226 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 AK4P27144 223 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 ACTR1BP42025 376 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 ACTR1AP61163 376 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 RPL6Q02878 288 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 RPS6KA2Q15349 733 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 IMPG1Q17R60 797 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 KIF19Q2TAC6 998 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 AP5B1Q2VPB7 878 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 PRAMEF14Q5SWL7 426 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 PRAMEF13Q5VWM6 474 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 SUSD1Q6UWL2 747 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 SNX32Q86XE0 403 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 MIER2Q8N344 545 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 MFSD2AQ8NA29 543 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 FNDC5Q8NAU1 212 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 MIEF2Q96C03 454 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 MTFMTQ96DP5 389 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 SLC6A18Q96N87 628 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 RAB3IPQ96QF0 476 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 HBEGFQ99075 208 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 RTKNQ9BST9 563 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 TBC1D10AQ9BXI6 508 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 PCDHGA11Q9Y5H2 935 aa17.08■□□□□ 0.32
SHKBP1-224ENST00000600718 OR52A4PA6NMU1 304 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 C1GALT1C1LP0DN25 315 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 CD22P20273 847 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 NDUFS1P28331 727 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 KCNJ2P63252 427 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 ILF3Q12906 894 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 EIF2B5Q13144 721 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 FZD2Q14332 565 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 AGKQ53H12 422 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 THEMIS2Q5TEJ8 643 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 ATG9BQ674R7 924 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 DEFB119Q8N690 84 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 RBM15BQ8NDT2 890 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 SLC5A11Q8WWX8 675 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 SDR39U1Q9NRG7 319 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms