RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 UNKQ9C0B0 810 aaKnown RBP14.64□□□□□ -0.07
LIG1-219ENST00000600055 AKIRIN1Q9H9L7 192 aaPredicted RBP14.64□□□□□ -0.07
LIG1-219ENST00000600055 FANCEQ9HB96 536 aa14.64□□□□□ -0.07
LIG1-219ENST00000600055 PARVBQ9HBI1 364 aa14.64□□□□□ -0.07
LIG1-219ENST00000600055 STOX2Q9P2F5 926 aaPredicted RBP14.64□□□□□ -0.07
LIG1-219ENST00000600055 LAMA5O15230 3695 aa14.64□□□□□ -0.07
LIG1-219ENST00000600055 ZFHX4Q86UP3 3567 aa14.64□□□□□ -0.07
LIG1-219ENST00000600055 EPG5Q9HCE0 2579 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 NPEPPSL1A6NEC2 478 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 CDC7O00311 574 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 SCRG1O75711 98 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 WISP3O95389 354 aaPredicted RBP14.63□□□□□ -0.07
LIG1-219ENST00000600055 MSL3P1P0C860 447 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 LIFP15018 202 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 RPA3P35244 121 aaPredicted RBP14.63□□□□□ -0.07
LIG1-219ENST00000600055 SPRP35270 261 aaPredicted RBP14.63□□□□□ -0.07
LIG1-219ENST00000600055 GMPRP36959 345 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 HSD17B2P37059 387 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 SLC12A2P55011 1212 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 ARHGAP40Q5TG30 622 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 CEP128Q6ZU80 1094 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 SPATA6LQ8N4H0 392 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 NKAPQ8N5F7 415 aaKnown RBP14.63□□□□□ -0.07
LIG1-219ENST00000600055 SLC38A9Q8NBW4 561 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 OR8K5Q8NH50 307 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 PDLIM5Q96HC4 596 aaKnown RBP14.63□□□□□ -0.07
LIG1-219ENST00000600055 CCDC138Q96M89 665 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 FCRL4Q96PJ5 515 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 CHRNA10Q9GZZ6 450 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 SPRTNQ9H040 489 aaPredicted RBP14.63□□□□□ -0.07
LIG1-219ENST00000600055 PRORYQ9H606 182 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 SYTL2Q9HCH5 934 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 GPAMQ9HCL2 828 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 SLC6A20Q9NP91 592 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 TAC3Q9UHF0 121 aa14.63□□□□□ -0.07
LIG1-219ENST00000600055 ZNF839A8K0R7 811 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 FAM153BP0C7A2 387 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 CMPK1P30085 196 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 PHBP35232 272 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 ITGA1P56199 1179 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 TMPRSS3P57727 454 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 NAB1Q13506 487 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 MAP7Q14244 749 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 FAM153CQ494X1 144 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 TEX35Q5T0J7 233 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 CCDC81Q6ZN84 652 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 MCATQ8IVS2 390 aaKnown RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 GSPT2Q8IYD1 628 aaKnown RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 ESX1Q8N693 406 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 UHMK1Q8TAS1 419 aaKnown RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 N4BP2L2Q92802 583 aaPredicted RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 TSPYL1Q9H0U9 437 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 ATG10Q9H0Y0 220 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 ACSS3Q9H6R3 686 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 POPDC3Q9HBV1 291 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 MRPS30Q9NP92 439 aaKnown RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 INTS7Q9NVH2 962 aaKnown RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 SERTAD3Q9UJW9 196 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 LHX6Q9UPM6 363 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 PLCL2Q9UPR0 1127 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 CFAP47Q6ZTR5 3102 aa14.62□□□□□ -0.07
LIG1-219ENST00000600055 KMT2BQ9UMN6 2715 aaPredicted RBP14.62□□□□□ -0.07
LIG1-219ENST00000600055 IGKV1-8A0A0C4DH67 115 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 E7EQ34 232 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 H3BMH7 237 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 CTSVO60911 334 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 CPNE3O75131 537 aaKnown RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 FKBP9O95302 570 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 GUCA1CO95843 209 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 F8A1P23610 371 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 STAT5AP42229 794 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 UCNP55089 124 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 TBPL1P62380 186 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 VAC14Q08AM6 782 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 ABHD18Q0P651 414 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 ILF2Q12905 390 aaKnown RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 GPS2Q13227 327 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 BMPR2Q13873 1038 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 SLMAPQ14BN4 828 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 UAP1Q16222 522 aaPredicted RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 ZXDCQ2QGD7 858 aaPredicted RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 ICE2Q659A1 982 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 FAM199XQ6PEV8 388 aaPredicted RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 AGTRAPQ6RW13 159 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 SBSNQ6UWP8 590 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 CMC1Q7Z7K0 106 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 ZUFSPQ96AP4 578 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 ALKBH8Q96BT7 664 aaKnown RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 TSPAN17Q96FV3 270 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 CYTH2Q99418 400 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 DPH7Q9BTV6 452 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 FUT8Q9BYC5 575 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 ARL15Q9NXU5 204 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 UTP6Q9NYH9 597 aaKnown RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 IL17BQ9UHF5 180 aa14.61□□□□□ -0.07
LIG1-219ENST00000600055 RALYQ9UKM9 306 aaKnown RBP14.61□□□□□ -0.07
LIG1-219ENST00000600055 HMX2A2RU54 273 aa14.6□□□□□ -0.07
LIG1-219ENST00000600055 TARM1B6A8C7 271 aa14.6□□□□□ -0.07
LIG1-219ENST00000600055 K7ENP7 123 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms