RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 L2HGDHQ9H9P8 463 aa14.01□□□□□ -0.17
VRK3-206ENST00000594090 PARVBQ9HBI1 364 aa14.01□□□□□ -0.17
VRK3-206ENST00000594090 POPDC3Q9HBV1 291 aa14.01□□□□□ -0.17
VRK3-206ENST00000594090 PCDHB3Q9Y5E6 796 aa14.01□□□□□ -0.17
VRK3-206ENST00000594090 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
VRK3-206ENST00000594090 PKD1L2Q7Z442 2459 aa14.01□□□□□ -0.17
VRK3-206ENST00000594090 LOC101059948A0A1B0GTJ6 334 aa14□□□□□ -0.17
VRK3-206ENST00000594090 E7ENX8 843 aa14□□□□□ -0.17
VRK3-206ENST00000594090 K7ENP7 123 aa14□□□□□ -0.17
VRK3-206ENST00000594090 MT-ND3P03897 115 aa14□□□□□ -0.17
VRK3-206ENST00000594090 RHOXF2BP0C7M4 288 aa14□□□□□ -0.17
VRK3-206ENST00000594090 WT1P19544 449 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 RPA3P35244 121 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 GRIA3P42263 894 aa14□□□□□ -0.17
VRK3-206ENST00000594090 SLC12A2P55011 1212 aa14□□□□□ -0.17
VRK3-206ENST00000594090 TAP2Q03519 686 aa14□□□□□ -0.17
VRK3-206ENST00000594090 TSTA3Q13630 321 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 PHKG1Q16816 387 aa14□□□□□ -0.17
VRK3-206ENST00000594090 UBAP2Q5T6F2 1119 aaKnown RBP14□□□□□ -0.17
VRK3-206ENST00000594090 GRTP1Q5TC63 336 aa14□□□□□ -0.17
VRK3-206ENST00000594090 ARHGAP40Q5TG30 622 aa14□□□□□ -0.17
VRK3-206ENST00000594090 FCRL6Q6DN72 434 aa14□□□□□ -0.17
VRK3-206ENST00000594090 INO80CQ6PI98 192 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 MBOAT1Q6ZNC8 495 aa14□□□□□ -0.17
VRK3-206ENST00000594090 LRRC56Q8IYG6 542 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 DNAJC22Q8N4W6 341 aa14□□□□□ -0.17
VRK3-206ENST00000594090 NKAPQ8N5F7 415 aaKnown RBP14□□□□□ -0.17
VRK3-206ENST00000594090 CCDC138Q96M89 665 aa14□□□□□ -0.17
VRK3-206ENST00000594090 RHOXF2Q9BQY4 288 aa14□□□□□ -0.17
VRK3-206ENST00000594090 ACAT2Q9BWD1 397 aa14□□□□□ -0.17
VRK3-206ENST00000594090 CDC42EP4Q9H3Q1 356 aaKnown RBP14□□□□□ -0.17
VRK3-206ENST00000594090 CAB39LQ9H9S4 337 aa14□□□□□ -0.17
VRK3-206ENST00000594090 GPN2Q9H9Y4 310 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 STOX2Q9P2F5 926 aaPredicted RBP14□□□□□ -0.17
VRK3-206ENST00000594090 TAC3Q9UHF0 121 aa14□□□□□ -0.17
VRK3-206ENST00000594090 SERTAD3Q9UJW9 196 aa14□□□□□ -0.17
VRK3-206ENST00000594090 PLCL2Q9UPR0 1127 aa14□□□□□ -0.17
VRK3-206ENST00000594090 MTO1Q9Y2Z2 717 aaKnown RBP14□□□□□ -0.17
VRK3-206ENST00000594090 AHCTF1Q8WYP5 2266 aa14□□□□□ -0.17
VRK3-206ENST00000594090 E7EQ34 232 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 H3BMH7 237 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 FAM155BO75949 473 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 WISP3O95389 354 aaPredicted RBP13.99□□□□□ -0.17
VRK3-206ENST00000594090 CMPK1P30085 196 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 PHBP35232 272 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 USP10Q14694 798 aaKnown RBP13.99□□□□□ -0.17
VRK3-206ENST00000594090 NAA25Q14CX7 972 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 GPR155Q7Z3F1 870 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 GPR135Q8IZ08 494 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 ZUFSPQ96AP4 578 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 KIAA1143Q96AT1 154 aaPredicted RBP13.99□□□□□ -0.17
VRK3-206ENST00000594090 TSPAN17Q96FV3 270 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 GPAMQ9HCL2 828 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 SLC6A20Q9NP91 592 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 MRPS30Q9NP92 439 aaKnown RBP13.99□□□□□ -0.17
VRK3-206ENST00000594090 IKZF3Q9UKT9 509 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 NFU1Q9UMS0 254 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 PCDHGA4Q9Y5G9 962 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 CACNA1BQ00975 2339 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 LOC400499M0QZD8 3231 aa13.99□□□□□ -0.17
VRK3-206ENST00000594090 TARM1B6A8C7 271 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 PHGDHO43175 533 aaKnown RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 NRP2O60462 931 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 OR2B3O76000 313 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 CTSBP07858 339 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ENO2P09104 434 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 SPRP35270 261 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 AP1S2P56377 157 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 TBPL1P62380 186 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 YBX1P67809 324 aaKnown RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 GPS2Q13227 327 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ZKSCAN8Q15776 578 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 ICE2Q659A1 982 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 SBSNQ6UWP8 590 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 SLC38A9Q8NBW4 561 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ANKRD49Q8WVL7 239 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ANKRD7Q92527 254 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 DPH7Q9BTV6 452 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ACTR5Q9H9F9 607 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 LHX9Q9NQ69 397 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 CCDC177Q9NQR7 707 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 ABCF3Q9NUQ8 709 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 EURLQ9NYK6 297 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 CROTQ9UKG9 612 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 PADI1Q9ULC6 663 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 IGKV1-8A0A0C4DH67 115 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 OR2A25A4D2G3 310 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 PABPN1LA6NDY0 278 aaKnown RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 NPEPPSL1A6NEC2 478 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 ZNF749O43361 778 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 CTSVO60911 334 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 CCNDBP1O95273 360 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 ACSL3O95573 720 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 HIST1H2AGP0C0S8 130 aaPredicted RBP13.98□□□□□ -0.17
VRK3-206ENST00000594090 CCNYL3P0C7X3 344 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 STMN1P16949 149 aa13.98□□□□□ -0.17
VRK3-206ENST00000594090 HIST1H2ADP20671 130 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms