RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	NELL1	Q92832	810 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PYURF	Q96I23	114 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MUS81	Q96NY9	551 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	KAT8	Q9H7Z6	458 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DNAJC11	Q9NVH1	559 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	VAPA	Q9P0L0	249 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC25A13	Q9UJS0	675 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PDE10A	Q9Y233	779 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ASB1	Q9Y576	335 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CPQ	Q9Y646	472 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	KIAA1671	Q9BY89	1806 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MYO7A	Q13402	2215 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ANAPC1	Q9H1A4	1944 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PLXNA4	Q9HCM2	1894 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	IGLV3-16	A0A075B6K0	115 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TRBV5-3	A0A0A0MS03	114 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TRAV19	A0A0A6YYK7	116 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516		H0Y858	1186 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516		H3BMQ9	156 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	UPK1A	O00322	258 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GAPDHS	O14556	408 aa	Predicted RBP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GRM6	O15303	877 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC16A6	O15403	523 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FGF19	O95750	216 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	BCL10	O95999	233 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ITGAM	P11215	1152 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZNF30	P17039	623 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ITGB6	P18564	788 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RPL17	P18621	184 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LTBR	P36941	435 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCR3	P51677	355 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZXDA	P98168	799 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DMC1	Q14565	340 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPANXN4	Q5MJ08	99 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	C6orf141	Q5SZD1	244 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	C10orf62	Q5T681	223 aa	Predicted RBP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GPR107	Q5VW38	600 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TMEM214	Q6NUQ4	689 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TMEM26	Q6ZUK4	368 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPNS2	Q8IVW8	549 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PLPP6	Q8IY26	295 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	OFCC1	Q8IZS5	231 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ARL10	Q8N8L6	244 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	VPS37A	Q8NEZ2	397 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FBXO30	Q8TB52	745 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZNF566	Q969W8	418 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	EID2B	Q96D98	161 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	COG8	Q96MW5	612 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TM6SF2	Q9BZW4	377 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GABARAPL1	Q9H0R8	117 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ADNP	Q9H2P0	1102 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TOR3A	Q9H497	397 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SUV39H2	Q9H5I1	410 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PIF1	Q9H611	641 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TLR9	Q9NR96	1032 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PSME2	Q9UL46	239 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TPRKB	Q9Y3C4	175 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	INSL5	Q9Y5Q6	135 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MICAL3	Q7RTP6	2002 aa		13.67	□□□□□ -0.22
NEDD4L-223	ENST00000588516		A0A1B0GTW7	788 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516		A0A1B0GVG6	124 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FFAR3	O14843	346 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GPR42	O15529	346 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DPM1	O60762	260 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FTH1	P02794	183 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPATA31D3	P0C874	917 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ATXN8OS	P0DMR3	200 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CRHBP	P24387	322 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	AOAH	P28039	575 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ASMT	P46597	345 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ID4	P47928	161 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	C21orf58	P58505	322 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CXCR4	P61073	352 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PPP2R2B	Q00005	443 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DLX2	Q07687	328 aa	Predicted RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	VAC14	Q08AM6	782 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SMAD4	Q13485	552 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SELPLG	Q14242	412 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	COL19A1	Q14993	1142 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PON2	Q15165	354 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PHKG1	Q16816	387 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PLEKHG6	Q3KR16	790 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SHQ1	Q6PI26	577 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GCNT7	Q6ZNI0	430 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPATA31D4	Q6ZUB0	917 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCDC149	Q6ZUS6	474 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DDX53	Q86TM3	631 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TMEM173	Q86WV6	379 aa	Predicted RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DDHD1	Q8NEL9	900 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FAM110B	Q8TC76	370 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FNDC8	Q8TC99	324 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ECHDC3	Q96DC8	303 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SMIM14	Q96QK8	99 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	YME1L1	Q96TA2	773 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	APOL4	Q9BPW4	351 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms