RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 MAPK15Q8TD08 544 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 PTPMT1Q8WUK0 201 aaPredicted RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 RASL10AQ92737 203 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 ARSGQ96EG1 525 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 FAM120BQ96EK7 910 aaKnown RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 PRICKLE1Q96MT3 831 aaPredicted RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 MS4A10Q96PG2 267 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 RAB11FIP5Q9BXF6 653 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 FAM207AQ9NSI2 230 aaPredicted RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 FAM120CQ9NX05 1096 aaKnown RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 ZNF69Q9UC07 566 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 STUB1Q9UNE7 303 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 PTRH2Q9Y3E5 179 aaKnown RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 TRIM17Q9Y577 477 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 KIF27Q86VH2 1401 aa3.34□□□□□ -1.88
COPS3-217ENST00000583160 A0A1W2PR80 420 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 FEZF1A0PJY2 475 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 MEIS2O14770 477 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 SMIM18P0DKX4 95 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 SLC2A2P11168 524 aaPredicted RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 GCH1P30793 250 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 PTGER3P43115 390 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 NRIP1P48552 1158 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 TMEM50BP56557 158 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 CREB5Q02930 508 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 MOGAT2Q3SYC2 334 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 G2E3Q7L622 706 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 TMPRSS11BQ86T26 416 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 C17orf53Q8N3J3 647 aaPredicted RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 GUF1Q8N442 669 aaKnown RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 MCUQ8NE86 351 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 SSMEM1Q8WWF3 244 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 TIGD1Q96MW7 591 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 CHCHD6Q9BRQ6 235 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 FAM49AQ9H0Q0 323 aaPredicted RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 THAP2Q9H0W7 228 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 PANK3Q9H999 370 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 Q9N2K0 584 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 GKN1Q9NS71 199 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 TEX10Q9NXF1 929 aaPredicted RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 WBP11Q9Y2W2 641 aaKnown RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 ABCC2Q92887 1545 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 UGGT2Q9NYU1 1516 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 KDM5BQ9UGL1 1544 aa3.33□□□□□ -1.88
COPS3-217ENST00000583160 PPRC1Q5VV67 1664 aaKnown RBP3.33□□□□□ -1.88
COPS3-217ENST00000583160 LOC102723996A0A087X1L8 192 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 GPR75-ASB3A0A0A6YYF3 556 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 A0A1W2PPR1 153 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 A6NCN8 305 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 DARSP14868 501 aaKnown RBP3.32□□□□□ -1.88
COPS3-217ENST00000583160 CSTF2P33240 577 aaKnown RBP eCLIP3.32□□□□□ -1.88
COPS3-217ENST00000583160 CSNK2BP67870 215 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 PAX8Q06710 450 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 CA9Q16790 459 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 MTHFSDQ2M296 383 aaKnown RBP3.32□□□□□ -1.88
COPS3-217ENST00000583160 SYT14P1Q58G82 188 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 C11orf63Q6NUN7 778 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 C1orf122Q6ZSJ8 110 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 SZRD1Q7Z422 152 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 LINC00612Q8N6U2 182 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 GATAD1Q8WUU5 269 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 NKX3-1Q99801 234 aaPredicted RBP3.32□□□□□ -1.88
COPS3-217ENST00000583160 ZHX3Q9H4I2 956 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 OPA3Q9H6K4 179 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 ITIH6Q6UXX5 1313 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 CARMIL1Q5VZK9 1371 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 PLB1Q6P1J6 1458 aa3.32□□□□□ -1.88
COPS3-217ENST00000583160 MAP3K4Q9Y6R4 1608 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 IQGAP2Q13576 1575 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 DISP1Q96F81 1524 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 TNIKQ9UKE5 1360 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 LOC100509620A0A075B734 347 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 TRUB2O95900 331 aaKnown RBP3.31□□□□□ -1.88
COPS3-217ENST00000583160 IGHV3-13P01766 116 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 IGHEP01854 428 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 CAPN3P20807 821 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 CDH13P55290 713 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 MAT1AQ00266 395 aaKnown RBP3.31□□□□□ -1.88
COPS3-217ENST00000583160 PEX6Q13608 980 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 LY6DQ14210 128 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 UGT3A2Q3SY77 523 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 SLC35D3Q5M8T2 416 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 TMEM211Q6ICI0 200 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 UGT3A1Q6NUS8 523 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 APOBEC4Q8WW27 367 aaKnown RBP3.31□□□□□ -1.88
COPS3-217ENST00000583160 LPGAT1Q92604 370 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 AGAP4Q96P64 663 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 WNT5BQ9H1J7 359 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 MED20Q9H944 212 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 TRPV4Q9HBA0 871 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 EQTNQ9NQ60 294 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 DPP3Q9NY33 737 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 CSNK1G3Q9Y6M4 447 aa3.31□□□□□ -1.88
COPS3-217ENST00000583160 KDM6BO15054 1643 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 PTPRGP23470 1445 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 DNASE1P24855 282 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms