RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 SPATA22Q8NHS9 363 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 C10orf90Q96M02 699 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 ADGRE3Q9BY15 652 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 ZCCHC2Q9C0B9 1178 aaKnown RBP10.46□□□□□ -0.73
GGA3-206ENST00000578773 TP63Q9H3D4 680 aaPredicted RBP10.46□□□□□ -0.73
GGA3-206ENST00000578773 SYNPO2LQ9H987 977 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 COG4Q9H9E3 785 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 ZNF304Q9HCX3 659 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 PNPLA3Q9NST1 481 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 ZNF282Q9UDV7 671 aaPredicted RBP10.46□□□□□ -0.73
GGA3-206ENST00000578773 CIDEBQ9UHD4 219 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 EDARQ9UNE0 448 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 FAM215AQ9Y5M1 114 aa10.46□□□□□ -0.73
GGA3-206ENST00000578773 FREM3P0C091 2139 aa10.46□□□□□ -0.74
GGA3-206ENST00000578773 USF3Q68DE3 2245 aa10.46□□□□□ -0.74
GGA3-206ENST00000578773 TENM1Q9UKZ4 2725 aa10.46□□□□□ -0.74
GGA3-206ENST00000578773 IGLV3-12A0A075B6K2 115 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 LOC102723996A0A087X1L8 192 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 OR2W5A6NFC9 320 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 ISM1B1AKI9 464 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 GLI4P10075 376 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 RARAP10276 462 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 CD46P15529 392 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 TFEBP19484 476 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 MSH3P20585 1137 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 SOX5P35711 763 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 PPP1R2P41236 205 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 VSX2P58304 361 aaPredicted RBP10.45□□□□□ -0.74
GGA3-206ENST00000578773 OCA2Q04671 838 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 BCL7AQ4VC05 210 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 C10orf62Q5T681 223 aaPredicted RBP10.45□□□□□ -0.74
GGA3-206ENST00000578773 SLC25A25Q6KCM7 469 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 H3F3CQ6NXT2 135 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 WDR53Q7Z5U6 358 aaPredicted RBP10.45□□□□□ -0.74
GGA3-206ENST00000578773 YTHDF3Q7Z739 585 aaKnown RBP10.45□□□□□ -0.74
GGA3-206ENST00000578773 TAX1BP1Q86VP1 789 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 P3H2Q8IVL5 708 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 MAPK1IP1LQ8NDC0 245 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 OR52N2Q8NGI0 321 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 OR5M3Q8NGP4 307 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 HM13Q8TCT9 377 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 ZNF592Q92610 1267 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 ZNF285Q96NJ3 590 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 UTP23Q9BRU9 249 aaKnown RBP10.45□□□□□ -0.74
GGA3-206ENST00000578773 MENTQ9BUN1 341 aa10.45□□□□□ -0.74
GGA3-206ENST00000578773 LOC105369274A0A096LPK9 316 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 LOC102723532A0A0G2JNH3 316 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 GLYATL1P3A0A0U1RQE8 302 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 RCCD1A6NED2 376 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 TMEM191CA6NGB0 347 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 GABRR3A8MPY1 467 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 TMCO5BA8MYB1 307 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 TFECO14948 347 aaPredicted RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 NME2P1O60361 137 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 CTSVO60911 334 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 MYBL2P10244 700 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 FBLP22087 321 aaKnown RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 NME2P22392 152 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 CES1P23141 567 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 CXCR2P25025 360 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 CHRNA4P43681 627 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 OC90Q02509 493 aaPredicted RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 SLC10A2Q12908 348 aaPredicted RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 LONRF2Q1L5Z9 754 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 FBXW10Q5XX13 1052 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 KAZNQ674X7 775 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 PODNL1Q6PEZ8 512 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 TMEM205Q6UW68 189 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 UNC5DQ6UXZ4 953 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 OR4N4Q8N0Y3 316 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 TMEM178AQ8NBL3 297 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 RELL2Q8NC24 303 aaPredicted RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 MYRIPQ8NFW9 859 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 LINC00615Q96LM1 132 aaPredicted RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 TRMT1Q9NXH9 659 aaKnown RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 UBP1Q9NZI7 540 aa10.44□□□□□ -0.74
GGA3-206ENST00000578773 TDRKHQ9Y2W6 561 aaKnown RBP10.44□□□□□ -0.74
GGA3-206ENST00000578773 HYKKA2RU49 373 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 FITM1A5D6W6 292 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 HEXBP07686 556 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 CCNCP24863 283 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 SERPINB6P35237 376 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 ZFP36L2P47974 494 aaKnown RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 POLR2FP61218 127 aaKnown RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 GBE1Q04446 702 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 GRM7Q14831 915 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 DAZAP2Q15038 168 aaPredicted RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 BTBD16Q32M84 506 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 WASHC2DQ5SRD0 308 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 CPNE8Q86YQ8 564 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 PSTKQ8IV42 348 aaKnown RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 LGI4Q8N135 537 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 AMER3Q8N944 861 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 TTC29Q8NA56 475 aaPredicted RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 LINC01555Q8NAE3 123 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 LINC01560Q8TB33 94 aa10.43□□□□□ -0.74
GGA3-206ENST00000578773 TFGQ92734 400 aaPredicted RBP10.43□□□□□ -0.74
GGA3-206ENST00000578773 KIAA1191Q96A73 305 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms