RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 IL1RAPL1Q9NZN1 696 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 PCSK5Q92824 1860 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 FAM237BA0A1B0GVD1 139 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 FITM1A5D6W6 292 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 SDR42E2A6NKP2 422 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 ALPPP05187 535 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 PKMP14618 531 aaKnown RBP19.33■□□□□ 0.68
CLN6-207ENST00000566347 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.68
CLN6-207ENST00000566347 CYP2A13Q16696 494 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 ANKRD20A4Q4UJ75 823 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 ANKRD22Q5VYY1 191 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 OVCH1Q7RTY7 1134 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 PPP1R32Q7Z5V6 425 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 GALNT16Q8N428 558 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 OR2L3Q8NG85 312 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 PNPLA2Q96AD5 504 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 MIPEPQ99797 713 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 SLAMF7Q9NQ25 335 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 FAM114A2Q9NRY5 505 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 SLC22A11Q9NSA0 550 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 ANKMY1Q9P2S6 941 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 MAST4O15021 2626 aa19.33■□□□□ 0.68
CLN6-207ENST00000566347 UMODP07911 640 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 ITGAXP20702 1163 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 VARSP26640 1264 aaKnown RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 PSMB5P28074 263 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 COILP38432 576 aaPredicted RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 RAPSNQ13702 412 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 THOC5Q13769 683 aaKnown RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 MYBPC3Q14896 1274 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 CYP1B1Q16678 543 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 KCTD19Q17RG1 926 aaPredicted RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 TTLL9Q3SXZ7 439 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 ZNF470Q6ECI4 717 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 CCDC137Q6PK04 289 aaKnown RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 CENPUQ71F23 418 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 OR2A1Q8NGT9 310 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 OR9A1PQ8NGU1 263 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 ZNF669Q96BR6 464 aaPredicted RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 FAM136AQ96C01 138 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 SLC26A1Q9H2B4 701 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 TSR3Q9UJK0 312 aaKnown RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 NXT1Q9UKK6 140 aaKnown RBP19.32■□□□□ 0.68
CLN6-207ENST00000566347 MAP4K5Q9Y4K4 846 aa19.32■□□□□ 0.68
CLN6-207ENST00000566347 A0A1W2PPV9 198 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 CTAGE9A4FU28 777 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 KRT87PA6NCN2 255 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 AGPSO00116 658 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 PGRMC1O00264 195 aaKnown RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 CTSVO60911 334 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 PSIP1O75475 530 aaKnown RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 USP1O94782 785 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 IPO13O94829 963 aaKnown RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 CATP04040 527 aaKnown RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 ERGP11308 486 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 MMP11P24347 488 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 MCM3P25205 808 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 CMPK1P30085 196 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 HSD17B2P37059 387 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 VSX2P58304 361 aaPredicted RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 ARHGAP19Q14CB8 494 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 KLHL38Q2WGJ6 581 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 ACSBG2Q5FVE4 666 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 WASHC2DQ5SRD0 308 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 SLC6A19Q695T7 634 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 NEK10Q6ZWH5 1172 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 RBMXL3Q8N7X1 1067 aaKnown RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 MS4A14Q96JA4 679 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 SERPINB12Q96P63 405 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 MFRPQ9BY79 579 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 CCDC68Q9H2F9 335 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 ATP13A2Q9NQ11 1180 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 KLHL42Q9P2K6 505 aa19.31■□□□□ 0.68
CLN6-207ENST00000566347 USP9XQ93008 2570 aaPredicted RBP19.31■□□□□ 0.68
CLN6-207ENST00000566347 PCM1Q15154 2024 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 ZNF839A8K0R7 811 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 ARHGEF33A8MVX0 844 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 MYO1CO00159 1063 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 PHF2O75151 1096 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 CLCN7P51798 805 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 SOX8P57073 446 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 INPP5JQ15735 1006 aaPredicted RBP19.3■□□□□ 0.68
CLN6-207ENST00000566347 NKG7Q16617 165 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.3■□□□□ 0.68
CLN6-207ENST00000566347 RNF44Q7L0R7 432 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 LMNTD2Q8IXW0 634 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 GRK7Q8WTQ7 553 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 SMPDL3AQ92484 453 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 TM9SF4Q92544 642 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 VPS50Q96JG6 964 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 TRIM56Q9BRZ2 755 aaKnown RBP19.3■□□□□ 0.68
CLN6-207ENST00000566347 GALPQ9UBC7 116 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 CDC23Q9UJX2 597 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 NEU2Q9Y3R4 380 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 NUP210LQ5VU65 1888 aa19.3■□□□□ 0.68
CLN6-207ENST00000566347 A0A0J9YVX5 310 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 GOLGA6L10A0A0M3HER8 536 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 HYKKA2RU49 373 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 OR2A25A4D2G3 310 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 GOLGA8MH3BSY2 632 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms