RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	GGTA1P	Q4G0N0	100 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	CARD16	Q5EG05	197 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	CDKL4	Q5MAI5	379 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	GRAMD4	Q6IC98	578 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	RETSAT	Q6NUM9	610 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	CNKSR3	Q6P9H4	555 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	CRTC3	Q6UUV7	619 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	HIPK1	Q86Z02	1210 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	SLC22A15	Q8IZD6	547 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	TMEM132C	Q8N3T6	1108 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZNF566	Q969W8	418 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	TBC1D20	Q96BZ9	403 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	ITCH	Q96J02	903 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	CCDC138	Q96M89	665 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	TOX2	Q96NM4	488 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	TSSK3	Q96PN8	268 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	NODAL	Q96S42	347 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	LYSMD1	Q96S90	227 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	BARD1	Q99728	777 aa	Known RBP	12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	TRIT1	Q9H3H1	467 aa	Known RBP	12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	RAD21L1	Q9H4I0	556 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	RC3H2	Q9HBD1	1191 aa	Known RBP	12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	ARL15	Q9NXU5	204 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	KCTD5	Q9NXV2	234 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	GPRC5B	Q9NZH0	403 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	MBD1	Q9UIS9	605 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	ENPP5	Q9UJA9	477 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	BAG5	Q9UL15	447 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	CLEC4E	Q9ULY5	219 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	PCDHGB1	Q9Y5G3	927 aa		12.81	□□□□□ -0.36
SCAPER-215	ENST00000565507	PTGES3L	E9PB15	166 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507		M0QX08	132 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	PRAMEF4	O60810	478 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	MITF	O75030	526 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	DNAJB5	O75953	348 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	ITGAM	P11215	1152 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	PRPS2	P11908	318 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	HOXB6	P17509	224 aa	Known RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	PRPH2	P23942	346 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	ACVR2A	P27037	513 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	TAF12	Q16514	161 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	RFX4	Q33E94	735 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	PRAMEF9	Q5VWM5	478 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	C16orf87	Q6PH81	154 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CRTC1	Q6UUV9	634 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	FAM217A	Q8IXS0	508 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	ABHD11	Q8NFV4	315 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CNIH3	Q8TBE1	160 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CHPT1	Q8WUD6	406 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	SELENOM	Q8WWX9	145 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	EGLN2	Q96KS0	407 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	WARS2	Q9UGM6	360 aa	Known RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	SOBP	A7XYQ1	873 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	NPIPB8	E9PQR5	432 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	XPNPEP2	O43895	674 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	SULT1C4	O75897	302 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	NR4A1	P22736	598 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	PSMD7	P51665	324 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	EMX1	Q04741	257 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	BOP1	Q14137	746 aa	Known RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	DGKK	Q5KSL6	1271 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	NEK5	Q6P3R8	708 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	TTC23L	Q6PF05	361 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	SHQ1	Q6PI26	577 aa	Known RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CEP68	Q76N32	757 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	ANKRD13B	Q86YJ7	626 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	HOMEZ	Q8IX15	550 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CENPS	Q8N2Z9	138 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	PIK3C3	Q8NEB9	887 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	POP5	Q969H6	163 aa	Known RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZNF689	Q96CS4	500 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	APIP	Q96GX9	242 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	RMND5A	Q9H871	391 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CHCHD3	Q9NX63	227 aa	Known RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	KLHL42	Q9P2K6	505 aa		12.8	□□□□□ -0.36
SCAPER-215	ENST00000565507	BCKDK	O14874	412 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	FSHR	P23945	695 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	CD6	P30203	668 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	MAPK8	P45983	427 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	PPP3CC	P48454	512 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	RAD23A	P54725	363 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	GSTM4	Q03013	218 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	KCNC4	Q03721	635 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	GBX1	Q14549	363 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ATP13A5	Q4VNC0	1218 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZDHHC21	Q8IVQ6	265 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	SLC39A11	Q8N1S5	342 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	FAR1	Q8WVX9	515 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	TMEM169	Q96HH4	297 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	SLC12A9	Q9BXP2	914 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	GABARAPL1	Q9H0R8	117 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ABCG8	Q9H221	673 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ATP13A3	Q9H7F0	1226 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	THG1L	Q9NWX6	298 aa	Known RBP	12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZDHHC3	Q9NYG2	299 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ABCG2	Q9UNQ0	655 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms