RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SLC22A18Q96BI1 424 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 PDLIM2Q96JY6 352 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 ZNF552Q9H707 407 aaPredicted RBP17.75■□□□□ 0.43
CLN6-204ENST00000564752 IL1RAPL1Q9NZN1 696 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 ASIC3Q9UHC3 531 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 VPS9D1Q9Y2B5 631 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 SNRNP200O75643 2136 aaKnown RBP17.75■□□□□ 0.43
CLN6-204ENST00000564752 SHANK1Q9Y566 2161 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 MAGEB16A2A368 324 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 NIPSNAP2O75323 286 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 SEMA7AO75326 666 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ONECUT2O95948 504 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 S1PR4O95977 384 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ESR1P03372 595 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ALAS2P22557 587 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ARSFP54793 590 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 THOC5Q13769 683 aaKnown RBP17.74■□□□□ 0.43
CLN6-204ENST00000564752 ANKRD20A4Q4UJ75 823 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ZNF470Q6ECI4 717 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 NEPROQ6NW34 567 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 TTC23LQ6PF05 361 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 CILP2Q8IUL8 1156 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 TMEM151BQ8IW70 566 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 C2orf73Q8N5S3 287 aaPredicted RBP17.74■□□□□ 0.43
CLN6-204ENST00000564752 NAT8LQ8N9F0 302 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 OR2L8Q8NGY9 312 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 DLG3Q92796 817 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 C19orf60Q96EN9 201 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 BIRC8Q96P09 236 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 IL17FQ96PD4 163 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 DDX47Q9H0S4 455 aaKnown RBP17.74■□□□□ 0.43
CLN6-204ENST00000564752 ENAMQ9NRM1 1142 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 CIDEBQ9UHD4 219 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 CRYL1Q9Y2S2 319 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 MAD1L1Q9Y6D9 718 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ICE1Q9Y2F5 2266 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 ESPL1Q14674 2120 aa17.74■□□□□ 0.43
CLN6-204ENST00000564752 MASP2O00187 686 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 RASGRF2O14827 1237 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 KLHL41O60662 606 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 ALPPP05187 535 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 ITGAXP20702 1163 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 MAGEA3P43357 314 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 ADARP55265 1226 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 GNG11P61952 73 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 MRPL49Q13405 166 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 EIF2S3LQ2VIR3 472 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 FCRL6Q6DN72 434 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 FIGLAQ6QHK4 219 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 TTLL10Q6ZVT0 673 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 DENND1AQ8TEH3 1009 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 SSC4DQ8WTU2 575 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 NACC2Q96BF6 587 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 FAM136AQ96C01 138 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 SNRNP40Q96DI7 357 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 FOPNLQ96NB1 174 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 RAB11FIP5Q9BXF6 653 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 SLC29A3Q9BZD2 475 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 ATP13A2Q9NQ11 1180 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 INTS7Q9NVH2 962 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 INTS10Q9NVR2 710 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 CUEDC1Q9NWM3 386 aaPredicted RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 PLEKHB1Q9UF11 243 aaPredicted RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 TSR3Q9UJK0 312 aaKnown RBP17.73■□□□□ 0.43
CLN6-204ENST00000564752 SLC39A10Q9ULF5 831 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 B3GNT3Q9Y2A9 372 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 MRFAP1Q9Y605 127 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 FER1L5A0AVI2 2057 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 NOTCH2Q04721 2471 aa17.73■□□□□ 0.43
CLN6-204ENST00000564752 A0A1B0GX78 115 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 CTAGE9A4FU28 777 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 E5RI56 91 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 PRICKLE3O43900 615 aaPredicted RBP17.72■□□□□ 0.43
CLN6-204ENST00000564752 USP1O94782 785 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 CHRM3P20309 590 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 GRIA3P42263 894 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 BDKRB1P46663 353 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 PTK6Q13882 451 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 SF1Q15637 639 aaKnown RBP17.72■□□□□ 0.43
CLN6-204ENST00000564752 CYP2A13Q16696 494 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 ZC3H12BQ5HYM0 836 aaKnown RBP17.72■□□□□ 0.43
CLN6-204ENST00000564752 RNASEH2BQ5TBB1 312 aaKnown RBP17.72■□□□□ 0.43
CLN6-204ENST00000564752 CNSTQ6PJW8 725 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 CENPUQ71F23 418 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 OVCH1Q7RTY7 1134 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 TAX1BP1Q86VP1 789 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 IQCKQ8N0W5 287 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 RAB42Q8N4Z0 105 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 ZUFSPQ96AP4 578 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 FKBP10Q96AY3 582 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 CAPZA3Q96KX2 299 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 MAP10Q9P2G4 905 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 RUVBL2Q9Y230 463 aaKnown RBP17.72■□□□□ 0.43
CLN6-204ENST00000564752 NFS1Q9Y697 457 aa17.72■□□□□ 0.43
CLN6-204ENST00000564752 ZCWPW2A0A1B0GU75 182 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 TARM1B6A8C7 271 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 AGPSO00116 658 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 IPO13O94829 963 aaKnown RBP17.71■□□□□ 0.43
CLN6-204ENST00000564752 FKBP9O95302 570 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms