RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FGF5P12034 268 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 CCL4P13236 92 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ST6GAL1P15907 406 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ITIH1P19827 911 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ETV5P41161 510 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 GABRA4P48169 554 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 SEPHS1P49903 392 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 GABREP78334 506 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ABATP80404 500 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ACY1Q03154 408 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 PRDX1Q06830 199 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 NAA25Q14CX7 972 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ACAP2Q15057 778 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 TGFBIQ15582 683 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 SF1Q15637 639 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 FAM83EQ2M2I3 478 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 TAF1BQ53T94 588 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 SNAP47Q5SQN1 464 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 FBXO38Q6PIJ6 1188 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 AGTRAPQ6RW13 159 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 RAPH1Q70E73 1250 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 SYTL1Q8IYJ3 562 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 OR2L3Q8NG85 312 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 OR8K5Q8NH50 307 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 STAG3L4Q8TBR4 150 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 PTERQ96BW5 349 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 NXNL1Q96CM4 212 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 TCTN2Q96GX1 697 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 PPM1MQ96MI6 270 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 TEFMQ96QE5 360 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ATOH8Q96SQ7 321 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 TMEM109Q9BVC6 243 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 SGPP1Q9BX95 441 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ASPSCR1Q9BZE9 553 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ROPN1BQ9BZX4 212 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 SPRY4Q9C004 299 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ZMYND15Q9H091 742 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 PCBD2Q9H0N5 130 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ROPN1Q9HAT0 212 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ARL15Q9NXU5 204 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 ANKMY1Q9P2S6 941 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 CIDEBQ9UHD4 219 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 APC2O95996 2303 aa9.28□□□□□ -0.92
RABGGTA-221ENST00000561055 FRYQ5TBA9 3013 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 PMS2P1A4D2B8 440 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 NPEPPSL1A6NEC2 478 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 EFCAB7A8K855 629 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 C9orf172C9J069 976 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 MAP3K7O43318 606 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 BRINP1O60477 761 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 CDH16O75309 829 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 TNFSF15O95150 251 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 CCNDBP1O95273 360 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 HGFP14210 728 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 NPPBP16860 134 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 HRH2P25021 359 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 CD82P27701 267 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 RBMS1P29558 406 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 CMPK1P30085 196 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 RPA3P35244 121 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 GRIA3P42263 894 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 KCNC1P48547 511 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 CYP4F3Q08477 520 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 OR4D1Q15615 310 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 ZIC1Q15915 447 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 TSNAXIP1Q2TAA8 658 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 TBC1D25Q3MII6 688 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 TMTC4Q5T4D3 741 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM164Q5U3C3 297 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 KIAA1614Q5VZ46 1190 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 ICE2Q659A1 982 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 FCRL6Q6DN72 434 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF425Q6IV72 752 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 FIGLAQ6QHK4 219 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 SUSD1Q6UWL2 747 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 LCTLQ6UWM7 567 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 UNQ6494/PRO21346Q6UXR6 183 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 CEACAM20Q6UY09 585 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 SH2D5Q6ZV89 423 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 GPSM1Q86YR5 675 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 TCAIMQ8N3R3 496 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 RIBC1Q8N443 379 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 SPATA6LQ8N4H0 392 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 DNAJC22Q8N4W6 341 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 C2orf73Q8N5S3 287 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 C19orf47Q8N9M1 422 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 KDF1Q8NAX2 398 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 PDPRQ8NCN5 879 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 KCTD4Q8WVF5 259 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 RHBDF1Q96CC6 855 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF501Q96CX3 271 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 MIPEPQ99797 713 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 PDE7BQ9NP56 450 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 FGF21Q9NSA1 209 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC39A1Q9NY26 324 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 PISDQ9UG56 409 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms