RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 FAM45AQ8TCE6 357 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PROKR1Q8TCW9 393 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CD200R1Q8TD46 325 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 EEF1AKMT1Q8WVE0 214 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ATL1Q8WXF7 558 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SMPDL3AQ92484 453 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 EXTL1Q92935 676 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 RERGQ96A58 199 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 MED8Q96G25 268 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CCDC138Q96M89 665 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PPM1MQ96MI6 270 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 IL17FQ96PD4 163 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 KCNK17Q96T54 332 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MIPEPQ99797 713 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 DHRS4Q9BTZ2 278 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MENTQ9BUN1 341 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ACAT2Q9BWD1 397 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SLC12A9Q9BXP2 914 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 NLNQ9BYT8 704 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 FAM129AQ9BZQ8 928 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PHACTR1Q9C0D0 580 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 TWSG1Q9GZX9 223 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 DPH5Q9H2P9 285 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ACTL8Q9H568 366 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PARVBQ9HBI1 364 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MRPS30Q9NP92 439 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 SAYSD1Q9NPB0 183 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ARL15Q9NXU5 204 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ANKMY1Q9P2S6 941 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MTRF1LQ9UGC7 380 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 NDOR1Q9UHB4 597 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CIDEBQ9UHD4 219 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 GPN3Q9UHW5 284 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 RALYQ9UKM9 306 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 G3BP2Q9UN86 482 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 SNX7Q9UNH6 387 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 RUVBL2Q9Y230 463 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 POLHQ9Y253 713 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 FARSAQ9Y285 508 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 PCDHGA6Q9Y5G7 932 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 NFS1Q9Y697 457 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ZFC3H1O60293 1989 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 SCN8AQ9UQD0 1980 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 KIF26BQ2KJY2 2108 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ZNF106Q9H2Y7 1883 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 A0A1B0GX78 115 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CTAGE15A4D2H0 777 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ARHGEF33A8MVX0 844 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 E7ENX8 843 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 E7ESA3 106 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 MKRN2OSH3BPM6 223 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 GFYI3L273 518 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TXNDC9O14530 226 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FANCGO15287 622 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 NKX2-8O15522 239 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CREG1O75629 220 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 IGHEP01854 428 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 EIF2S1P05198 315 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 ENO2P09104 434 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 RAB40ALP0C0E4 278 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FAM87AP0C7U9 286 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CTAGE8P0CG41 777 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TPBGLP0DKB5 382 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 EZRP15311 586 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 STX2P32856 288 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PHBP35232 272 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 GRIA3P42263 894 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 RRADP55042 308 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CDKN2DP55273 166 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 AP1S2P56377 157 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 MRPS25P82663 173 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 POU4F1Q01851 419 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 GUCY2DQ02846 1103 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TAP2Q03519 686 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PRDX1Q06830 199 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 GPS2Q13227 327 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 SRSF6Q13247 344 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 LY6DQ14210 128 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FASTKQ14296 549 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 GRB7Q14451 532 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ZIC1Q15915 447 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TBR1Q16650 682 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 MUM1Q2TAK8 710 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 DEFB110Q30KQ9 67 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 NKAIN1Q4KMZ8 207 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 GLE1Q53GS7 698 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 SOWAHCQ53LP3 525 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 HECTD2Q5U5R9 776 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PRAMEF17Q5VTA0 474 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ICE2Q659A1 982 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 DUPD1Q68J44 220 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CAPN13Q6MZZ7 669 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 RHBDD2Q6NTF9 364 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FAM199XQ6PEV8 388 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 TRMT10BQ6PF06 316 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 FIGLAQ6QHK4 219 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PAQR3Q6TCH7 311 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 SUSD1Q6UWL2 747 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ZNF517Q6ZMY9 492 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms