RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 RPS21P63220 83 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 OTUD4Q01804 1114 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 RAD51Q06609 339 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PPIDQ08752 370 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 ABHD18Q0P651 414 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 SGCGQ13326 291 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 MSLNQ13421 630 aaPredicted RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 SEMA5AQ13591 1074 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 HNRNPDQ14103 355 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 ZNF235Q14590 738 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ACOX1Q15067 660 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 E2F5Q15329 346 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ALG11Q2TAA5 492 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 DEFB133Q30KQ1 61 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 SETMARQ53H47 684 aaPredicted RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 TEX44Q53QW1 395 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 FAXCQ5TGI0 409 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ARMC6Q6NXE6 501 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PPP1R2P3Q6NXS1 205 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PNCKQ6P2M8 343 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 NEK5Q6P3R8 708 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 Q6ZPA2 131 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 DPPA4Q7L190 304 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 TMPRSS9Q7Z410 1059 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PTAR1Q7Z6K3 402 aaPredicted RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 DSG4Q86SJ6 1040 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 NRROSQ86YC3 692 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 LRRC8AQ8IWT6 810 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 CCDC13Q8IYE1 715 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 CCDC170Q8IYT3 715 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 RCOR2Q8IZ40 523 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ADGRG5Q8IZF4 528 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ZNF567Q8N184 647 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ATPAF2Q8N5M1 289 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 SLC25A41Q8N5S1 370 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ACTL9Q8TC94 416 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 KIAA1524Q8TCG1 905 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 LMX1AQ8TE12 382 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 CXorf40AQ8TE69 158 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 PATE1Q8WXA2 126 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 LRTOMTQ8WZ04 291 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 TADA1Q96BN2 335 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PTCD3Q96EY7 689 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 SCRN2Q96FV2 425 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 CNDP2Q96KP4 475 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 APOLD1Q96LR9 279 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ZNF641Q96N77 438 aaPredicted RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 SLC46A1Q96NT5 459 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 OLFM3Q96PB7 478 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 TRIB3Q96RU7 358 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 NRTNQ99748 197 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 NCAPGQ9BPX3 1015 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ZNF670Q9BS34 389 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 MLPHQ9BV36 600 aaPredicted RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 RIOK2Q9BVS4 552 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 MAK16Q9BXY0 300 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 PCED1AQ9H1Q7 454 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 UGT1A7Q9HAW7 530 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 UGT1A10Q9HAW8 530 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 UGT1A8Q9HAW9 530 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 GLOD4Q9HC38 313 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 BPIFA1Q9NP55 256 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 DYRK4Q9NR20 520 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 SPATS2LQ9NUQ6 558 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 GEMIN8Q9NWZ8 242 aaKnown RBP4.2□□□□□ -1.74
SPG11-211ENST00000558561 SMARCAL1Q9NZC9 954 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PHTF1Q9UMS5 762 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 GUCA1BQ9UMX6 200 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 PPIL1Q9Y3C6 166 aa4.2□□□□□ -1.74
SPG11-211ENST00000558561 ZFHX4Q86UP3 3567 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 TRGV11A0A075B6L2 103 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 A0A0J9YYE9 177 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 PIPSLA2A3N6 862 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CPED1A4D0V7 1026 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 TRABD2BA6NFA1 517 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 USP27XA6NNY8 438 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ANKRD66B4E2M5 251 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 FPGTO14772 594 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 INPP4BO15327 924 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 USP12O75317 370 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 MTX2O75431 263 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 METTL18O95568 372 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 LDOC1O95751 146 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 TRBC1P01850 177 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CSF2P04141 144 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ATP1A1P05023 1023 aaKnown RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 ZSCAN5DPP0CG00 497 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 EGR2P11161 476 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 TGM2P21980 687 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CTNNA2P26232 953 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 AKT2P31751 481 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CXCR5P32302 372 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 HTR7P34969 479 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 HOXD12P35452 270 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CYLC1P35663 651 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 TRIM23P36406 574 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 GRIA1P42261 906 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SLC1A1P43005 524 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 KCNJ1P48048 391 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms