RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HBQ1P09105 142 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 HIST1H2AGP0C0S8 130 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 HIST1H2ADP20671 130 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 CMPK1P30085 196 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 GP5P40197 560 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 PNLIPRP1P54315 467 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 ITGA1P56199 1179 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 GPX6P59796 221 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 NAB1Q13506 487 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 ARHGAP40Q5TG30 622 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 FIGLAQ6QHK4 219 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 CDHR3Q6ZTQ4 885 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 TIPARPQ7Z3E1 657 aaKnown RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 VASH2Q86V25 355 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 GPR135Q8IZ08 494 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 ZUFSPQ96AP4 578 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 PDLIM5Q96HC4 596 aaKnown RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 HIST1H2AHQ96KK5 128 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 CCDC138Q96M89 665 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 OLFM1Q99784 485 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 HIST1H2AJQ99878 128 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 H2AFJQ9BTM1 129 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 SLC12A9Q9BXP2 914 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 TRIM54Q9BYV2 358 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 SLC7A5P2Q9GIP4 190 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 GPN2Q9H9Y4 310 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 PARVBQ9HBI1 364 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 LRRC4CQ9HCJ2 640 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 SMYD2Q9NRG4 433 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 PADI1Q9ULC6 663 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 TEX51A0A1B0GUA7 166 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 A0A1W2PPV9 198 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 E7EQ34 232 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 EFSO43281 561 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 CCNDBP1O95273 360 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 TIAF1O95411 115 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 SLC16A8O95907 504 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 NTRK1P04629 796 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-211ENST00000557623 LIFP15018 202 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 MAGP20916 626 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 SAT1P21673 171 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 PHBP35232 272 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 RPA3P35244 121 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-211ENST00000557623 STAT5AP42229 794 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 MMP16P51512 607 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 POU4F1Q01851 419 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 FASTKQ14296 549 aaKnown RBP12.02□□□□□ -0.49
SLIRP-211ENST00000557623 ZIC1Q15915 447 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 ZC3H12BQ5HYM0 836 aaKnown RBP12.02□□□□□ -0.49
SLIRP-211ENST00000557623 GRTP1Q5TC63 336 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 RELL1Q8IUW5 271 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 CTAGE3PQ8IX95 158 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 SYTL1Q8IYJ3 562 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 DNAJC22Q8N4W6 341 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 NKAPQ8N5F7 415 aaKnown RBP12.02□□□□□ -0.49
SLIRP-211ENST00000557623 OR2L3Q8NG85 312 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 OR2A1Q8NGT9 310 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 OR1L3Q8NH93 324 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 FBF1Q8TES7 1133 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF480Q8WV37 535 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 IFT81Q8WYA0 676 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 ANKRD7Q92527 254 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 CRELD1Q96HD1 420 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 LRFN5Q96NI6 719 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 FMO2Q99518 471 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 RBBP8Q99708 897 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 MCMBPQ9BTE3 642 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 FAM60AQ9NP50 221 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.49
SLIRP-211ENST00000557623 ANKMY1Q9P2S6 941 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 PLCL2Q9UPR0 1127 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 KLK4Q9Y5K2 254 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 AP1M2Q9Y6Q5 423 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 SPTBP11277 2137 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 AHCTF1Q8WYP5 2266 aa12.02□□□□□ -0.49
SLIRP-211ENST00000557623 MDC1Q14676 2089 aaKnown RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 LOC101059948A0A1B0GTJ6 334 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 KRT87PA6NCN2 255 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 CXorf49A8MYA2 514 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 OR2B3O76000 313 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 TSPAN12O95859 305 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 ENO2P09104 434 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF37AP17032 561 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 SPRP35270 261 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 GRIA3P42263 894 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 AP1S2P56377 157 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 TAS2R39P59534 338 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 MC1RQ01726 317 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 RHDQ02161 417 aa12.01□□□□□ -0.49
SLIRP-211ENST00000557623 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 TSTA3Q13630 321 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-211ENST00000557623 KBTBD12Q3ZCT8 623 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms