RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 TCTE1Q5JU00 501 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 ADALQ6DHV7 355 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 JADE1Q6IE81 842 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 CFAP77Q6ZQR2 320 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 TMTC3Q6ZXV5 915 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 SLC16A9Q7RTY1 509 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF843Q8N446 348 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF383Q8NA42 475 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 NAXEQ8NCW5 288 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 C7orf26Q96N11 449 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 DACH2Q96NX9 599 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 DDOQ99489 341 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 RBM4BQ9BQ04 359 aaKnown RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 SYT11Q9BT88 431 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 UTP14AQ9BVJ6 771 aaKnown RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 PLK3Q9H4B4 646 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 SH2D4AQ9H788 454 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 PNMA2Q9UL42 364 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF609O15014 1411 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 ASTN2O75129 1339 aaPredicted RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 PTPRFP10586 1907 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 SPTBN5Q9NRC6 3674 aaKnown RBP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF197O14709 1029 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 NDUFS4O43181 175 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 SH3BP5O60239 455 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 HS6ST1O60243 411 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 DDX58O95786 925 aaKnown RBP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 RAF1P04049 648 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 CEBPBP17676 345 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 NOVP48745 357 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 GMPSP49915 693 aaPredicted RBP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 DSCR10P59022 87 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 PRAMEP78395 509 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 PPP2R2BQ00005 443 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 G3BP1Q13283 466 aaKnown RBP eCLIP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 GRAPQ13588 217 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 GCNT6Q5T4J0 391 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 ARID3BQ8IVW6 561 aaPredicted RBP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 TEX11Q8IYF3 940 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF614Q8N883 585 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 TDRD7Q8NHU6 1098 aaKnown RBP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 FGFBP3Q8TAT2 258 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 GRHL3Q8TE85 626 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 PPM1MQ96MI6 270 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF582Q96NG8 517 aaPredicted RBP4.42□□□□□ -1.7
PRPF39-209ENST00000556353 SLC22A12Q96S37 553 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 IWS1Q96ST2 819 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 CABLES2Q9BTV7 478 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 MUC13Q9H3R2 512 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 SLA2Q9H6Q3 261 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 FLRT3Q9NZU0 649 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 POLLQ9UGP5 575 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 CMAHPQ9Y471 501 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 SESN1Q9Y6P5 492 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 SH3TC1Q8TE82 1336 aa4.42□□□□□ -1.7
PRPF39-209ENST00000556353 DOCK3Q8IZD9 2030 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 CDK5RAP2Q96SN8 1893 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 MYO5AQ9Y4I1 1855 aaKnown RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 SSC5DA1L4H1 1573 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 MED19A0JLT2 244 aaPredicted RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 DNM1LO00429 736 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 RNASEH2AO75792 299 aaKnown RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 ZFAND5O76080 213 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 ACP2P11117 423 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 KRT2P35908 639 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 PPARGP37231 505 aaPredicted RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 SLC6A12P48065 614 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 CAMPP49913 170 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 LBX1P52954 281 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 LGALS3BPQ08380 585 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 TRIM65Q6PJ69 517 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 MMS22LQ6ZRQ5 1243 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 PPP1R42Q7Z4L9 355 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 PXKQ7Z7A4 578 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF554Q86TJ5 538 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 TICAM1Q8IUC6 712 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 DAZLQ92904 295 aaKnown RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 EVI5LQ96CN4 794 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 NSL1Q96IY1 281 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 MYADMQ96S97 322 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 C1QTNF1Q9BXJ1 281 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 DNAJC18Q9H819 358 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 DBNDD1Q9H9R9 158 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 TRMT112Q9UI30 125 aaKnown RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 CORO1CQ9ULV4 474 aaPredicted RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 NENFQ9UMX5 172 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 SPIN1Q9Y657 262 aaPredicted RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.41□□□□□ -1.7
PRPF39-209ENST00000556353 CDHR2Q9BYE9 1310 aa4.41□□□□□ -1.7
PRPF39-209ENST00000556353 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 ELOVL7A1L3X0 281 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 A8MZ25 164 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 CELF2O95319 508 aaKnown RBP4.4□□□□□ -1.71
PRPF39-209ENST00000556353 IGKV5-2P06315 115 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 HOXB7P09629 217 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 RARGP13631 454 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 HOXC13P31276 330 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 COPB2P35606 906 aa4.4□□□□□ -1.71
PRPF39-209ENST00000556353 CDR2Q01850 454 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms