RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 VITQ6UXI7 678 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 FRMD7Q6ZUT3 714 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 DPPA4Q7L190 304 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ASRGL1Q7L266 308 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ADAMTSL2Q86TH1 951 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 GPSM1Q86YR5 675 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 WFDC8Q8IUA0 241 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CPNE9Q8IYJ1 553 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 LSMEM2Q8N112 164 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 MYO1HQ8N1T3 1032 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ARHGAP24Q8N264 748 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PTGR2Q8N8N7 351 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 AGR3Q8TD06 166 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CD200R1Q8TD46 325 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 EEF1AKMT1Q8WVE0 214 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 EXT2Q93063 718 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PTERQ96BW5 349 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PHF21BQ96EK2 531 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 LINGO1Q96FE5 620 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 DCUN1D1Q96GG9 259 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PPP1R16AQ96I34 528 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 HIC2Q96JB3 615 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ZFYVE19Q96K21 471 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ATOH8Q96SQ7 321 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 EBF4Q9BQW3 602 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CCDC106Q9BWC9 280 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SPATA16Q9BXB7 569 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 NMUR2Q9GZQ4 415 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SLC40A1Q9NP59 571 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 TCF7L2Q9NQB0 619 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PFDN4Q9NQP4 134 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 DYRK4Q9NR20 520 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SPATS2LQ9NUQ6 558 aaKnown RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ARL8BQ9NVJ2 186 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 KCTD5Q9NXV2 234 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 NUDT4Q9NZJ9 180 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CD274Q9NZQ7 290 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 NFKBIL1Q9UBC1 381 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ZDHHC2Q9UIJ5 367 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CDYLQ9Y232 598 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 MED16Q9Y2X0 877 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF281Q9Y2X9 895 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PIAS3Q9Y6X2 628 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ANKRD12Q6UB98 2062 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PABPN1LA6NDY0 278 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 NPEPPSL1A6NEC2 478 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 WIPF3A6NGB9 483 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PRRT4C9JH25 899 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 C1QTNF3-AMACRE9PGA6 284 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 UBXN8O00124 270 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PSMD11O00231 422 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 EIF3FO00303 357 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 CDC7O00311 574 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 QSOX1O00391 747 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 KPNA3O00505 521 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 SLC22A2O15244 555 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 RAD51BO15315 384 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 GYG2O15488 501 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 KLK8O60259 260 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 CRCPO75575 148 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PPM1BO75688 479 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 CBX6O95503 412 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 APODP05090 189 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ENO1P06733 434 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 HLA-EP13747 358 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ENO3P13929 434 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 HNRNPLP14866 589 aaKnown RBP eCLIP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 EEF1DP29692 281 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PRDX6P30041 224 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ADSLP30566 484 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 AKT1P31749 480 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 GJA4P35212 333 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 UCNP55089 124 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 DCDC1P59894 354 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 MXRA7P84157 204 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 SEMG2Q02383 582 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ELAVL3Q14576 367 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TSNQ15631 228 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 HNRNPA1L2Q32P51 320 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ITPRIPL2Q3MIP1 535 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ATP13A5Q4VNC0 1218 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 GPRC6AQ5T6X5 926 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 VWA5B1Q5TIE3 1220 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 FAM46CQ5VWP2 391 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 NXNQ6DKJ4 435 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 SERPINA13PQ6UXR4 307 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 FRA10AC1Q70Z53 315 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 EFL1Q7Z2Z2 1120 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 MAVSQ7Z434 540 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 CUZD1Q86UP6 607 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TMPRSS6Q8IU80 811 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 NRSN1Q8IZ57 195 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 CLYBLQ8N0X4 340 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 KIF2BQ8N4N8 673 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TRAM1L1Q8N609 369 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ZBTB2Q8N680 514 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TERB1Q8NA31 727 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms