RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 GKN2Q86XP6 184 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 LRRC56Q8IYG6 542 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 FAM46DQ8NEK8 389 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 OR52E1Q8NGJ3 308 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SETD7Q8WTS6 366 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 ZDHHC1Q8WTX9 485 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 JPH3Q8WXH2 748 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SMPDL3AQ92484 453 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 PIGKQ92643 395 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 MAGEB10Q96LZ2 347 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 OR4K3Q96R72 315 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 OR52B2Q96RD2 323 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 NRTNQ99748 197 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 MIPEPQ99797 713 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SGPP1Q9BX95 441 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 XKR8Q9H6D3 395 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 KIR3DX1Q9H7L2 352 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 MEAF6Q9HAF1 191 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 TCF7L2Q9NQB0 619 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 GPRC5BQ9NZH0 403 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF624Q9P2J8 865 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SUSD2Q9UGT4 822 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 ZFP69BQ9UJL9 534 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 DNAJC15Q9Y5T4 150 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 KCNE2Q9Y6J6 123 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 KIR2DS5A0A0G2JLQ3 304 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 A0A0G2JNG1 304 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 E7EQ34 232 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 E9PBE3 544 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 KIR2DS3K7RE56 304 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 FCHO1O14526 889 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 AQP9O43315 295 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 KLHL41O60662 606 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 CCDC22O60826 627 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 KRT6AP02538 564 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 KRT6BP04259 564 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 ANXA6P08133 673 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 LINC00032P0C843 101 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 SP9P0CG40 484 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 ERGP11308 486 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 XRCC1P18887 633 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 GNAZP19086 355 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 NCF2P19878 526 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 PKLRP30613 574 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 CNR2P34972 360 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 KRT6CP48668 564 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 RAB28P51157 221 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 INHBCP55103 352 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 TUBB3Q13509 450 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 CAMK2BQ13554 666 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 DOC2AQ14183 400 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 KIR2DS5Q14953 304 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 PLCL1Q15111 1095 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 CPSF6Q16630 551 aaKnown RBP eCLIP9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 LSM12Q3MHD2 195 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 SGO1Q5FBB7 561 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 TCHHL1Q5QJ38 904 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 LIPJQ5W064 366 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 IL27RAQ6UWB1 636 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 LCTLQ6UWM7 567 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 C6orf89Q6UWU4 347 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 TMPRSS11BQ86T26 416 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 HOMEZQ8IX15 550 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 OR2L8Q8NGY9 312 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 CEP70Q8NHQ1 597 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 LCN9Q8WX39 176 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 PATE1Q8WXA2 126 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 MTFMTQ96DP5 389 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 C19orf60Q96EN9 201 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 LRRC37BQ96QE4 947 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 HAUS8Q9BT25 410 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 ACAT2Q9BWD1 397 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC29A3Q9BZD2 475 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 PCBD2Q9H0N5 130 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 MYLK2Q9H1R3 596 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 ZSCAN32Q9NX65 697 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 TAC3Q9UHF0 121 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 SNX6Q9UNH7 406 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 TRIM33Q9UPN9 1127 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 ICKQ9UPZ9 632 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 PTGDR2Q9Y5Y4 395 aa9.34□□□□□ -0.91
HNRNPC-220ENST00000555585 ATP6AP2A0A1C7CYW4 349 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 FAM86C2PA6NEL3 165 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 MANBAO00462 879 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 YY2O15391 372 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 UGDHO60701 494 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 SDC3O75056 442 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 VPS4BO75351 444 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 ATP6AP2O75787 350 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 KIAA0754O94854 1291 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 C1GALT1C1LP0DN25 315 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 JUPP14923 745 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 NPPBP16860 134 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 VARSP26640 1264 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 SHMT2P34897 504 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 HNF4AP41235 474 aa9.33□□□□□ -0.92
HNRNPC-220ENST00000555585 HTR6P50406 440 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms