RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 UGT3A1Q6NUS8 523 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 KIF6Q6ZMV9 814 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 SZRD1Q7Z422 152 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 TMPRSS11BQ86T26 416 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 CATSPERDQ86XM0 798 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 GUF1Q8N442 669 aaKnown RBP2.84□□□□□ -1.95
SNX6-204ENST00000555541 POC5Q8NA72 575 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 APOBEC4Q8WW27 367 aaKnown RBP2.84□□□□□ -1.95
SNX6-204ENST00000555541 EQTNQ9NQ60 294 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 ZNF215Q9UL58 517 aaPredicted RBP2.84□□□□□ -1.95
SNX6-204ENST00000555541 PTRH2Q9Y3E5 179 aaKnown RBP2.84□□□□□ -1.95
SNX6-204ENST00000555541 CSNK1G3Q9Y6M4 447 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 HCFC1P51610 2035 aa2.84□□□□□ -1.95
SNX6-204ENST00000555541 ATRXP46100 2492 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 LOC100509620A0A075B734 347 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 DOK2O60496 412 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 ZBED4O75132 1171 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 TRUB2O95900 331 aaKnown RBP2.83□□□□□ -1.96
SNX6-204ENST00000555541 IGHEP01854 428 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 SMIM18P0DKX4 95 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 HLA-FP30511 346 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 CSTF2P33240 577 aaKnown RBP eCLIP2.83□□□□□ -1.96
SNX6-204ENST00000555541 CREB5Q02930 508 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 MTF1Q14872 753 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 EFTUD2Q15029 972 aaKnown RBP eCLIP2.83□□□□□ -1.96
SNX6-204ENST00000555541 UGT3A2Q3SY77 523 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 IGSF11Q5DX21 431 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 TMEM211Q6ICI0 200 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 C11orf63Q6NUN7 778 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 FRRS1Q6ZNA5 592 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 C1orf122Q6ZSJ8 110 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 POM121L12Q8N7R1 296 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 AQP11Q8NBQ7 271 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 LRRC15Q8TF66 581 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 LPGAT1Q92604 370 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 FAM20AQ96MK3 541 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 GAL3ST4Q96RP7 486 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 NKX3-1Q99801 234 aaPredicted RBP2.83□□□□□ -1.96
SNX6-204ENST00000555541 CHCHD6Q9BRQ6 235 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 FAM49AQ9H0Q0 323 aaPredicted RBP2.83□□□□□ -1.96
SNX6-204ENST00000555541 WNT5BQ9H1J7 359 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 GNB4Q9HAV0 340 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 TRPV4Q9HBA0 871 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 NDE1Q9NXR1 346 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 DPP3Q9NY33 737 aa2.83□□□□□ -1.96
SNX6-204ENST00000555541 PI4K2BG5E9Z4 385 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 DANCRP0C864 163 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 HAPLN1P10915 354 aaPredicted RBP2.82□□□□□ -1.96
SNX6-204ENST00000555541 CAPN3P20807 821 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 GCH1P30793 250 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 TSFMP43897 325 aaKnown RBP2.82□□□□□ -1.96
SNX6-204ENST00000555541 PCLAFQ15004 111 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 ZNF74Q16587 644 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 C15orf59Q2T9L4 293 aaPredicted RBP2.82□□□□□ -1.96
SNX6-204ENST00000555541 ZNF595Q8IYB9 648 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 MCUQ8NE86 351 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 SPDL1Q96EA4 605 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 SLC45A3Q96JT2 553 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 AGAP4Q96P64 663 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 TREX2Q9BQ50 279 aaPredicted RBP2.82□□□□□ -1.96
SNX6-204ENST00000555541 ABCB10Q9NRK6 738 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 ITIH6Q6UXX5 1313 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
SNX6-204ENST00000555541 MYH14Q7Z406 1995 aaKnown RBP2.81□□□□□ -1.96
SNX6-204ENST00000555541 LOC105371242A0A075B767 164 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 A6NCN8 305 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 MEIS2O14770 477 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 BCL3P20749 454 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 RXRGP48443 463 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 LBX1P52954 281 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 CDH13P55290 713 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 DLK1P80370 383 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 LEKR1Q6ZMV7 388 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 ARHGAP22Q7Z5H3 698 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 MARCH9Q86YJ5 346 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 RPAP2Q8IXW5 612 aaPredicted RBP2.81□□□□□ -1.96
SNX6-204ENST00000555541 MMD2Q8IY49 270 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 C17orf53Q8N3J3 647 aaPredicted RBP2.81□□□□□ -1.96
SNX6-204ENST00000555541 OR10S1Q8NGN2 331 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 C11orf45Q8TAV5 145 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 PIGBQ92521 554 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 SLAMF9Q96A28 289 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 TIGD1Q96MW7 591 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 SPAG5Q96R06 1193 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 RPP25Q9BUL9 199 aaKnown RBP2.81□□□□□ -1.96
SNX6-204ENST00000555541 OPA3Q9H6K4 179 aa2.81□□□□□ -1.96
SNX6-204ENST00000555541 C19orf25Q9UFG5 118 aaPredicted RBP2.81□□□□□ -1.96
SNX6-204ENST00000555541 ASB14A6NK59 587 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 H0YAE9 185 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 O00370 1275 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 PHOX2AO14813 284 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 HPRP00739 348 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 IGHV2-70P01814 119 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 GP1BBP13224 206 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 DNASE1P24855 282 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 HOXD13P35453 343 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 STAT2P52630 851 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 XGP55808 180 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 HNRNPKP61978 463 aaKnown RBP eCLIP2.8□□□□□ -1.96
SNX6-204ENST00000555541 CES4AQ5XG92 561 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms