RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 ISM1B1AKI9 464 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 IFRD1O00458 451 aaPredicted RBP11.13□□□□□ -0.63
SNRPF-205ENST00000553192 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
SNRPF-205ENST00000553192 ICAM2P13598 275 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 CD46P15529 392 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 IFI35P80217 286 aaPredicted RBP11.13□□□□□ -0.63
SNRPF-205ENST00000553192 PCBP2Q15366 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNRPF-205ENST00000553192 SYCP1Q15431 976 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 Q5PR19 223 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 CCDC122Q5T0U0 273 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 ZDHHC20Q5W0Z9 365 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 TMEM205Q6UW68 189 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 VWA5B2Q8N398 1253 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 SPATA22Q8NHS9 363 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 FAM71BQ8TC56 605 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 ZNF398Q8TD17 642 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 ZNF354BQ96LW1 612 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 OLFM1Q99784 485 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 UTP23Q9BRU9 249 aaKnown RBP11.13□□□□□ -0.63
SNRPF-205ENST00000553192 THAP2Q9H0W7 228 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
SNRPF-205ENST00000553192 OR6C2Q9NZP2 312 aa11.13□□□□□ -0.63
SNRPF-205ENST00000553192 HYKKA2RU49 373 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 TMCO5BA8MYB1 307 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 PES1O00541 588 aaKnown RBP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 AP2B1P63010 937 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 DAZAP2Q15038 168 aaPredicted RBP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 FAM214AQ32MH5 1076 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 CMPK2Q5EBM0 449 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 TCTE1Q5JU00 501 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 WASHC2DQ5SRD0 308 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 CCDC183Q5T5S1 534 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 HMBOX1Q6NT76 420 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 PRMT9Q6P2P2 845 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 LMNTD1Q8N9Z9 388 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 TTC29Q8NA56 475 aaPredicted RBP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 FAM98AQ8NCA5 519 aaKnown RBP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 SELENOSQ9BQE4 189 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 SYT11Q9BT88 431 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 TUBB6Q9BUF5 446 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNRPF-205ENST00000553192 PLAGL1Q9UM63 463 aa11.12□□□□□ -0.63
SNRPF-205ENST00000553192 IGHV3-20A0A0C4DH32 117 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 TRIM64A6NGJ6 449 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 TRIM64BA6NI03 449 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 CTSVO60911 334 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 SEC24DO94855 1032 aaPredicted RBP11.11□□□□□ -0.63
SNRPF-205ENST00000553192 TFEBP19484 476 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 CHRNA4P43681 627 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 SLC25A11Q02978 314 aaKnown RBP11.11□□□□□ -0.63
SNRPF-205ENST00000553192 KIR2DS3Q14952 304 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 FLYWCH1Q4VC44 716 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 ACAD11Q709F0 780 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 C10orf90Q96M02 699 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 Q96MF0 132 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 TRABDQ9H4I3 376 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
SNRPF-205ENST00000553192 A0A0G2JNJ9 132 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 GOLGA6L4A6NEF3 574 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 USP27XA6NNY8 438 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 GABRR3A8MPY1 467 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 AGAP14A8MT82 685 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 RASGRF2O14827 1237 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 NME2P1O60361 137 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 HEXBP07686 556 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 FBLP22087 321 aaKnown RBP11.1□□□□□ -0.63
SNRPF-205ENST00000553192 NME2P22392 152 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 ACADLP28330 430 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 RFC3P40938 356 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 ZFP36L2P47974 494 aaKnown RBP11.1□□□□□ -0.63
SNRPF-205ENST00000553192 VSX2P58304 361 aaPredicted RBP11.1□□□□□ -0.63
SNRPF-205ENST00000553192 OC90Q02509 493 aaPredicted RBP11.1□□□□□ -0.63
SNRPF-205ENST00000553192 CBLBQ13191 982 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 DPYSL3Q14195 570 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 KRT81Q14533 505 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 MAPKAPK3Q16644 382 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 MEP1AQ16819 746 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 ZC3H12BQ5HYM0 836 aaKnown RBP11.1□□□□□ -0.63
SNRPF-205ENST00000553192 ERICH6BQ5W0A0 696 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 PLAG1Q6DJT9 500 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 FRMPD2BQ6IN97 320 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 FIGLAQ6QHK4 219 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 PQLC3Q8N755 202 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 LINC01555Q8NAE3 123 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 CCNYQ8ND76 341 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 FAM222BQ8WU58 562 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 UBP1Q9NZI7 540 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 Q9UFV3 132 aa11.1□□□□□ -0.63
SNRPF-205ENST00000553192 CHD3Q12873 2000 aaKnown RBP11.09□□□□□ -0.63
SNRPF-205ENST00000553192 LOC105369274A0A096LPK9 316 aa11.09□□□□□ -0.63
SNRPF-205ENST00000553192 LOC102723532A0A0G2JNH3 316 aa11.09□□□□□ -0.63
SNRPF-205ENST00000553192 ARHGEF9O43307 516 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms