RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ERO1BQ86YB8 467 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ARMC8Q8IUR7 673 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CDKL3Q8IVW4 592 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CCDC60Q8IWA6 550 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ADGRF2Q8IZF7 708 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CADM3Q8N126 398 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ZNF786Q8N393 782 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 PARP8Q8N3A8 854 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SLC15A4Q8N697 577 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 RBMXL3Q8N7X1 1067 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FAM71DQ8N9W8 422 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SPERTQ8NA61 448 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FAM47BQ8NA70 645 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TDRD5Q8NAT2 981 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 GLIS1Q8NBF1 620 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SLC4A11Q8NBS3 891 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 KCTD6Q8NC69 237 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SLC44A5Q8NCS7 719 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 GMCL1P1Q8NEA9 526 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CMASQ8NFW8 434 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 RDM1Q8NG50 284 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 OR2T34Q8NGX1 318 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 OR2T3Q8NH03 318 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SPATA18Q8TC71 538 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FAM45AQ8TCE6 357 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TAS1R2Q8TE23 839 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 PHF10Q8WUB8 498 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 DEPDC1BQ8WUY9 529 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SEMA4DQ92854 862 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TMIGD2Q96BF3 282 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ROPN1LQ96C74 230 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FAF2Q96CS3 445 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 RMDN1Q96DB5 314 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CFAP36Q96G28 342 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ZNF486Q96H40 463 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SH3YL1Q96HL8 342 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TSNARE1Q96NA8 513 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 MOGAT1Q96PD6 335 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FYTTD1Q96QD9 318 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CPXM1Q96SM3 734 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CYP2S1Q96SQ9 504 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TBCBQ99426 244 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SORT1Q99523 831 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CPNE1Q99829 537 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 HOPXQ9BPY8 73 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 C11orf70Q9BRQ4 267 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 NTPCRQ9BSD7 190 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 DCUN1D5Q9BTE7 237 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SLC25A23Q9BV35 468 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 DPCDQ9BVM2 203 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TEKT3Q9BXF9 490 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FTHL17Q9BXU8 183 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 IL22Q9GZX6 179 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TRPV6Q9H1D0 765 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 LHX5Q9H2C1 402 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SNX25Q9H3E2 840 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CPVLQ9H3G5 476 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ZNF385DQ9H6B1 395 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 EPS8L2Q9H6S3 715 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 NANOGQ9H9S0 305 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 LIN28AQ9H9Z2 209 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SPC25Q9HBM1 224 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ZBTB26Q9HCK0 441 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 SPAG4Q9NPE6 437 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ACP6Q9NPH0 428 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 NECTIN3Q9NQS3 549 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CNGB3Q9NQW8 809 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 EIF2B3Q9NR50 452 aaKnown RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ANKEF1Q9NU02 776 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TBC1D22BQ9NU19 505 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TMEM184CQ9NVA4 438 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TMEM45AQ9NWC5 275 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 GDAP2Q9NXN4 497 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 NSMCE4AQ9NXX6 385 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 LPAR3Q9UBY5 353 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 CHORDC1Q9UHD1 332 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 TBX20Q9UMR3 447 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 ANKRD6Q9Y2G4 727 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 RAP2CQ9Y3L5 183 aa3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FNDC1Q4ZHG4 1894 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-203ENST00000550457 FRMPD2Q68DX3 1309 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 COL5A2P05997 1499 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 NHSL1Q5SYE7 1610 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 RNF103-CHMP3A0A140T963 221 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 A0A1W2PPW3 197 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 FAM170AA1A519 330 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 MAGEB16A2A368 324 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HACD1B0YJ81 288 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 F8VP50 259 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PI4K2BG5E9Z4 385 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GTPBP1O00178 669 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CYB561D2O14569 222 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 MSI1O43347 362 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SMAD6O43541 496 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TIMM44O43615 452 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ZBTB14O43829 449 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 JRKO75564 520 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 RFPL2O75678 378 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms