RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 TUBA1AQ71U36 451 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ALDH16A1Q8IZ83 802 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC7A5P1Q8MH63 180 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 OR13J1Q8NGT2 312 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 FUBP3Q96I24 572 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 C14orf119Q9NWQ9 140 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 DKK3Q9UBP4 350 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ZNF222Q9UK12 451 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 GPR45Q9Y5Y3 372 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 UBFD1O14562 309 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC28A2O43868 658 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CCNB2O95067 398 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 VIPP01282 170 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ITGB1P05556 798 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PRKAR1AP10644 381 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ANXA8P13928 327 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 MAGEA12P43365 314 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 MANFP55145 182 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 IL18Q14116 193 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SPCS2Q15005 226 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CHRNA6Q15825 494 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 LETMD1Q6P1Q0 360 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PLEKHG7Q6ZR37 379 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 NEK10Q6ZWH5 1172 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 USP30Q70CQ3 517 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC24A5Q71RS6 500 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 KRT74Q7RTS7 529 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CACUL1Q86Y37 369 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TCAIMQ8N3R3 496 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 DNAJB8Q8NHS0 232 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ISL2Q96A47 359 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TADA1Q96BN2 335 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ZBED3Q96IU2 234 aaPredicted RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TM9SF3Q9HD45 589 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PCDHGA11Q9Y5H2 935 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SMIM30A4D0T7 59 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 FABP12A6NFH5 140 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 LCKP06239 509 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 BCKDHAP12694 445 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 DCKP27707 260 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 HOXD12P35452 270 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 POLR2IP36954 125 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 BUD31P41223 144 aaPredicted RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 AFF1P51825 1210 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ZBTB6Q15916 424 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 IQCCQ4KMZ1 466 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 NEK5Q6P3R8 708 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 KDELC1Q6UW63 502 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SNX20Q7Z614 316 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 UXS1Q8NBZ7 420 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 XAGE5Q8WWM1 108 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 AP3S1Q92572 193 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PGAP3Q96FM1 320 aaPredicted RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TTPALQ9BTX7 342 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 RNF38Q9H0F5 515 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 MMP27Q9H306 513 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC32A1Q9H598 525 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TPT1P8Q9HAU6 139 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CLCA2Q9UQC9 943 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SCML2Q9UQR0 700 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 RUVBL1Q9Y265 456 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ACTL7AQ9Y615 435 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ILVBLA1L0T0 632 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SAP18O00422 153 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 ERAL1O75616 437 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CLDN7O95471 211 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 FYNP06241 537 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CYP2A6P11509 494 aaPredicted RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CRHBPP24387 322 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 NSG1P42857 185 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CD83Q01151 205 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TEAD4Q15561 434 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PTCHD3Q3KNS1 767 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 FRG2Q64ET8 278 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CDC73Q6P1J9 531 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CCBE1Q6UXH8 406 aaPredicted RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 AGMOQ6ZNB7 445 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 MBOAT1Q6ZNC8 495 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 VTCN1Q7Z7D3 282 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PELI3Q8N2H9 469 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC38A4Q969I6 547 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 MAELQ96JY0 434 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 FRG2BQ96QU4 278 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CTPS2Q9NRF8 586 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SEC14L3Q9UDX4 400 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CD300AQ9UGN4 299 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 CPQQ9Y646 472 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 M0QX08 132 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 GSTT2P0CG29 244 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 GSTT2BP0CG30 244 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 ITIH1P19827 911 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 HOXD10P28358 340 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 OR1E2P47887 323 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 SNAPC1Q16533 368 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 CYP27C1Q4G0S4 372 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 LRRTM3Q86VH5 581 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 OR5AK3PQ8NH89 298 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 C17orf50Q8WW18 174 aa9.96□□□□□ -0.81
SMARCC2-209ENST00000550164 ART5Q96L15 291 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms