RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PON2Q15165 354 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SLC1A5Q15758 541 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 KLHL12Q53G59 568 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 CENPIQ92674 756 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TFGQ92734 400 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 OR52E6Q96RD3 313 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TCF12Q99081 682 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SERHL2Q9H4I8 314 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SERHLQ9NQF3 203 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SEC14L3Q9UDX4 400 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 APOBEC3BQ9UH17 382 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 HS3ST4Q9Y661 456 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 LOXHD1Q8IVV2 1947 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 LOC285556D6RIA3 1793 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 LINC00854A0A1B0GVQ3 168 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TTC24A2A3L6 582 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 NPEPPSL1A6NEC2 478 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 HIDE1A8MVS5 230 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 FAM227AF5H4B4 570 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 COCHO43405 550 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 MTX2O75431 263 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 IFNGP01579 166 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PTGER3P43115 390 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SHHQ15465 462 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 GPR33Q49SQ1 333 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TIGD2Q4W5G0 525 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SAMD4BQ5PRF9 694 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ALYREFQ86V81 257 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ERI1Q8IV48 349 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 IZUMO1Q8IYV9 350 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PHOSPHO2Q8TCD6 241 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 RTP3Q9BQQ7 232 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 GBA3Q9H227 469 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 HCFC1R1Q9NWW0 138 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 LEF1Q9UJU2 399 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PCDHGA11Q9Y5H2 935 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 CFAP20Q9Y6A4 193 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 A0A0G2JN53 185 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 FAM237BA0A1B0GVD1 139 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 H0YC42 278 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 CYB5AP00167 134 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 PROCP04070 461 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 CTSAP10619 480 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 PRKACAP17612 351 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ECHS1P30084 290 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ACADVLP49748 655 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ERVFC1P60507 584 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 RIN1Q13671 783 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ANKRD22Q5VYY1 191 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 C22orf39Q6P5X5 142 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 SLC36A4Q6YBV0 504 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 BNIPLQ7Z465 357 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ADGRG6Q86SQ4 1221 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ZDHHC13Q8IUH4 622 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DEPDC4Q8N2C3 294 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 COX18Q8N8Q8 333 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 BCL7CQ8WUZ0 217 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-218ENST00000545889 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 RIBC2Q9H4K1 309 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 TAGLN3Q9UI15 199 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 GPR34Q9UPC5 381 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 BACE2Q9Y5Z0 518 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 A0A1B0GW55 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 KMOO15229 486 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX1O43812 170 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 CLDN9O95484 217 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 PRLP01236 227 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ALOX5P09917 674 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4L2P0CJ85 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4L3P0CJ86 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4L4P0CJ87 422 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4L5P0CJ88 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4L6P0CJ89 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4L7P0CJ90 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 MAGP20916 626 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 PCSK6P29122 969 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 S100GP29377 79 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 SCNN1AP37088 669 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 HSPA7P48741 367 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 MLLT6P55198 1093 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-218ENST00000545889 C9orf50Q5SZB4 431 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 RSPO2Q6UXX9 243 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF605Q86T29 641 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 TP53INP2Q8IXH6 220 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 UBE2J2Q8N2K1 259 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 TTLQ8NG68 377 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 OR4A15Q8NGL6 344 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 GPR151Q8TDV0 419 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 KCNN1Q92952 543 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 VPS35Q96QK1 796 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 APOL4Q9BPW4 351 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 RNF121Q9H920 327 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 S100A14Q9HCY8 104 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM30AQ9NV96 361 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 HRASLS2Q9NWW9 162 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 DUX4Q9UBX2 424 aa8.4□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF490Q9ULM2 529 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-218ENST00000545889 CFL2Q9Y281 166 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms