RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TPSD1Q9BZJ3 242 aa10.68□□□□□ -0.7
SCG3-202ENST00000542355 SNX6Q9UNH7 406 aa10.68□□□□□ -0.7
SCG3-202ENST00000542355 CCL27Q9Y4X3 112 aa10.68□□□□□ -0.7
SCG3-202ENST00000542355 KCNE1BA0A087WTH5 132 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 E7ENX8 843 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 SLC28A1O00337 649 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 PDYNP01213 254 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 IGLV3-19P01714 112 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 IGHV4-34P06331 123 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 GNAZP19086 355 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 ITGAXP20702 1163 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 PXNP49023 591 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 PNLIPRP1P54315 467 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 KIAA1024LP59773 190 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 ERVK-8P63133 956 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 TAP2Q03519 686 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 DOC2AQ14183 400 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 GGTA1PQ4G0N0 100 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 LIPJQ5W064 366 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 CAPRIN2Q6IMN6 1127 aaKnown RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 DUS1LQ6P1R4 473 aaKnown RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 GCNT7Q6ZNI0 430 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 DCUN1D3Q8IWE4 304 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 KLHDC8AQ8IYD2 350 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 FAM160A2Q8N612 972 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 FAM13CQ8NE31 585 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 OR1E3Q8WZA6 343 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 TSACCQ96A04 125 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 PDXPQ96GD0 296 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 SCARF2Q96GP6 870 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 CLPTM1LQ96KA5 538 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 C12orf66Q96MD2 445 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 FERD3LQ96RJ6 166 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 INSM2Q96T92 566 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 NPAS2Q99743 824 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 NRTNQ99748 197 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 EFCAB1Q9HAE3 211 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 SDR39U1Q9NRG7 319 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 WSB2Q9NYS7 404 aaPredicted RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 GPR45Q9Y5Y3 372 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 KCNE2Q9Y6J6 123 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 DOCK9Q9BZ29 2069 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 PDZK1P1A8MUH7 402 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 C9JVG2 144 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 KCNJ13O60928 360 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 RPN2P04844 631 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 SNRPB2P08579 225 aaKnown RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 SLC2A4P14672 509 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 JUPP14923 745 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 NPPBP16860 134 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 CD22P20273 847 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 IDSP22304 550 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 CD6P30203 668 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 ACADVLP49748 655 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 ART3Q13508 389 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 CLCA4Q14CN2 919 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 MAPRE2Q15555 327 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 MMEL1Q495T6 779 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 THEMIS2Q5TEJ8 643 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 KIAA0895LQ68EN5 471 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 Q6ZSR6 202 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 FUNDC1Q8IVP5 155 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 ARHGAP24Q8N264 748 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 KYQ8NBH2 561 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 NEIL2Q969S2 332 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 BIRC7Q96CA5 298 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 SLC45A3Q96JT2 553 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 PPP3R2Q96LZ3 170 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 WDR92Q96MX6 357 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 NELL2Q99435 816 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 TRIT1Q9H3H1 467 aaKnown RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 PRDM8Q9NQV8 689 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 IMP3Q9NV31 184 aaKnown RBP10.67□□□□□ -0.7
SCG3-202ENST00000542355 AIG1Q9NVV5 245 aa10.67□□□□□ -0.7
SCG3-202ENST00000542355 OR52A4PA6NMU1 304 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 PRAMEF26H0Y7S4 382 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 UGDHO60701 494 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 APBB3O95704 486 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 VARSP26640 1264 aaKnown RBP10.66□□□□□ -0.7
SCG3-202ENST00000542355 OXTRP30559 389 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 THOP1P52888 689 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 EMX2Q04743 252 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 STX5Q13190 355 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 IL23RQ5VWK5 629 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 RNF165Q6ZSG1 346 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 LRRC56Q8IYG6 542 aaPredicted RBP10.66□□□□□ -0.7
SCG3-202ENST00000542355 DSELQ8IZU8 1212 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 RNF175Q8N4F7 328 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 TMEM145Q8NBT3 493 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 TEX37Q96LM6 180 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 OR2M4Q96R27 311 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 SGPP1Q9BX95 441 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 MRPL1Q9BYD6 325 aaKnown RBP10.66□□□□□ -0.7
SCG3-202ENST00000542355 ACPTQ9BZG2 426 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
SCG3-202ENST00000542355 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
SCG3-202ENST00000542355 PNMA8BQ9ULN7 279 aaPredicted RBP10.66□□□□□ -0.7
SCG3-202ENST00000542355 HS3ST3A1Q9Y663 406 aa10.66□□□□□ -0.7
SCG3-202ENST00000542355 C10orf142B7Z368 130 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms