RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ACSL6Q9UKU0 697 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 NPEPPSL1A6NEC2 478 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 SLC9B1P1A6NJY1 282 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 CDRT15L2A8MXV6 281 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 TRIM49D1C9J1S8 452 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 CDC7O00311 574 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 IPO13O94829 963 aaKnown RBP18.1■□□□□ 0.49
VPS33A-205ENST00000541169 RBP1P09455 135 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 GCAP28676 217 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 SEPHS1P49903 392 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 PPP1CAP62136 330 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 PRDX1Q06830 199 aaKnown RBP18.1■□□□□ 0.49
VPS33A-205ENST00000541169 IFFO1Q0D2I5 559 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 TGFBIQ15582 683 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 TSNQ15631 228 aaKnown RBP18.1■□□□□ 0.49
VPS33A-205ENST00000541169 ZC3H12BQ5HYM0 836 aaKnown RBP18.1■□□□□ 0.49
VPS33A-205ENST00000541169 SULT1C3Q6IMI6 304 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 OR2L3Q8NG85 312 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 PRR11Q96HE9 360 aaPredicted RBP18.1■□□□□ 0.49
VPS33A-205ENST00000541169 RNF112Q9ULX5 631 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 TMCO1Q9UM00 188 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 SNX7Q9UNH6 387 aa18.1■□□□□ 0.49
VPS33A-205ENST00000541169 A0A1W2PPV9 198 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 KERAO60938 352 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 FGF5P12034 268 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 TFEBP19484 476 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 PEBP1P30086 187 aaKnown RBP18.09■□□□□ 0.49
VPS33A-205ENST00000541169 PGGT1BP53609 377 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 TBC1D25Q3MII6 688 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.09■□□□□ 0.49
VPS33A-205ENST00000541169 THEMIS2Q5TEJ8 643 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 FOXR1Q6PIV2 292 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 UNQ6494/PRO21346Q6UXR6 183 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 ISCA2Q86U28 154 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 LRRC56Q8IYG6 542 aaPredicted RBP18.09■□□□□ 0.49
VPS33A-205ENST00000541169 OR56A3Q8NH54 315 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 EGFL8Q99944 293 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 SGPP1Q9BX95 441 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 CAPS2Q9BXY5 557 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 VPS11Q9H270 941 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 MRPS30Q9NP92 439 aaKnown RBP18.09■□□□□ 0.49
VPS33A-205ENST00000541169 CIDEBQ9UHD4 219 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 SERTAD3Q9UJW9 196 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 RARRES3Q9UL19 164 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 PCM1Q15154 2024 aa18.09■□□□□ 0.49
VPS33A-205ENST00000541169 BRINP1O60477 761 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 GSTA1P08263 222 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 CCL4P13236 92 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 ST6GAL1P15907 406 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 MAPK10P53779 464 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 FOXM1Q08050 763 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 TUBB3Q13509 450 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 PRAMEF13Q5VWM6 474 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 ICE2Q659A1 982 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 METTL2BQ6P1Q9 378 aaKnown RBP18.08■□□□□ 0.48
VPS33A-205ENST00000541169 LCTLQ6UWM7 567 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 PPP1R3BQ86XI6 285 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 MARCH9Q86YJ5 346 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 CENPLQ8N0S6 344 aaPredicted RBP18.08■□□□□ 0.48
VPS33A-205ENST00000541169 PDPRQ8NCN5 879 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 N4BP2L2Q92802 583 aaPredicted RBP18.08■□□□□ 0.48
VPS33A-205ENST00000541169 FGF11Q92914 225 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 OR6C1Q96RD1 312 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 TMEM109Q9BVC6 243 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 TMEM121BQ9BXQ6 578 aaPredicted RBP18.08■□□□□ 0.48
VPS33A-205ENST00000541169 ASCL3Q9NQ33 180 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 FGF21Q9NSA1 209 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 IGSF5Q9NSI5 407 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 OCIAD1Q9NX40 245 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 NUDT4Q9NZJ9 180 aa18.08■□□□□ 0.48
VPS33A-205ENST00000541169 NCOR2Q9Y618 2525 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 A0A1W2PNU3 283 aaPredicted RBP18.07■□□□□ 0.48
VPS33A-205ENST00000541169 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.07■□□□□ 0.48
VPS33A-205ENST00000541169 GUCA1CO95843 209 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 MT-ND3P03897 115 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 GGT5P36269 586 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 GRIA3P42263 894 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 TBPL1P62380 186 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 CYP4F3Q08477 520 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 FASTKQ14296 549 aaKnown RBP18.07■□□□□ 0.48
VPS33A-205ENST00000541169 FIGLAQ6QHK4 219 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 TAX1BP1Q86VP1 789 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 KLHDC8AQ8IYD2 350 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 C2orf73Q8N5S3 287 aaPredicted RBP18.07■□□□□ 0.48
VPS33A-205ENST00000541169 HNRNPLLQ8WVV9 542 aaKnown RBP18.07■□□□□ 0.48
VPS33A-205ENST00000541169 USP7Q93009 1102 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 RHBDF1Q96CC6 855 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 NXNL1Q96CM4 212 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 MED8Q96G25 268 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 CD274Q9NZQ7 290 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 TAC3Q9UHF0 121 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 PLCL2Q9UPR0 1127 aa18.07■□□□□ 0.48
VPS33A-205ENST00000541169 SRPX2O60687 465 aaPredicted RBP18.06■□□□□ 0.48
VPS33A-205ENST00000541169 SHBGP04278 402 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 HGFP14210 728 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 KRT15P19012 456 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 ITIH1P19827 911 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 MAGP20916 626 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 SLC5A2P31639 672 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 PCBP4P57723 403 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms