RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SLC2A2P11168 524 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 CD36P16671 472 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 CSNK2A2P19784 350 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 MECP2P51608 486 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 CSTF1Q05048 431 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SPATA31D4Q6ZUB0 917 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 OR7D4Q8NG98 312 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SLC22A18Q96BI1 424 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 TUBGCP5Q96RT8 1024 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 YTHDF1Q9BYJ9 559 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 COQ10BQ9H8M1 238 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SALL4Q9UJQ4 1053 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 RBBP6Q7Z6E9 1792 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 EDIL3O43854 480 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 TPST2O60704 377 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 FKTNO75072 461 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 APOL3O95236 402 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 CYP3A5P20815 502 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SLC1A2P43004 574 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 TAS2R39P59534 338 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 NOGQ13253 232 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 TUBB3Q13509 450 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 MBOAT1Q6ZNC8 495 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 OR10G2Q8NGC3 310 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 OVCA2Q8WZ82 227 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 EFCAB11Q9BUY7 163 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 FKBPLQ9UIM3 349 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 K7EPI3 171 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 GABRDO14764 452 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ITGB1P05556 798 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SRPRAP08240 638 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 PRPS1L1P21108 318 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 PTGS2P35354 604 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 IDH3AP50213 366 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 EEFSECP57772 596 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ERVK-8P63133 956 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 CAP1Q01518 475 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SP2Q02086 613 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 MVKQ03426 396 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 PRKCDQ05655 676 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 DAG1Q14118 895 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 KLHL26Q53HC5 615 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 TNFAIP8L2Q6P589 184 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 MON1BQ7L1V2 547 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 GET4Q7L5D6 327 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SPATA22Q8NHS9 363 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 THAP6Q8TBB0 222 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 FAM110BQ8TC76 370 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ACBD6Q9BR61 282 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ACSS2Q9NR19 701 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 EIF2B3Q9NR50 452 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 CDC14AQ9UNH5 594 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 GOLGA4Q13439 2230 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 DNM1LO00429 736 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 UGT1A3P35503 534 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 RHBDL3P58872 404 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CYP2U1Q7Z449 544 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PAQR7Q86WK9 346 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 LINC00471Q8N535 108 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 OXR1Q8N573 874 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SMPDL3BQ92485 455 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TBL1XR1Q9BZK7 514 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TMEM168Q9H0V1 697 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 METTL8Q9H825 291 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SPATA7Q9P0W8 599 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 MKLN1Q9UL63 735 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SPEF1Q9Y4P9 236 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 KLHL33A6NCF5 533 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SYN3O14994 580 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SELPP16109 830 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 XKP51811 444 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 AP2S1P53680 142 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 DSC3Q14574 896 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TAF1AQ15573 450 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 KHDC1Q4VXA5 237 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 FBXO48Q5FWF7 155 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 C6orf89Q6UWU4 347 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 NUDT13Q86X67 352 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PRSS58Q8IYP2 241 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TOMM5Q8N4H5 51 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 HNRNPABQ99729 332 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CADM1Q9BY67 442 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 FANCFQ9NPI8 374 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ITM2CQ9NQX7 267 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 MTMR10Q9NXD2 777 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CYTH4Q9UIA0 394 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 NR2E1Q9Y466 385 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TOR1BO14657 336 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CSTBP04080 98 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 OR4Q2P0C623 313 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF3P17036 446 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 UGCGQ16739 394 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 FBXO43Q4G163 708 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GRHL2Q6ISB3 625 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SLC25A25Q6KCM7 469 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF782Q6ZMW2 699 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 FBXO15Q8NCQ5 510 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms