RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 KLHL41O60662 606 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ALBP02768 609 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ALPPP05187 535 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 MLNP12872 115 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 PKMP14618 531 aaKnown RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 ITGAXP20702 1163 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 OGNP20774 298 aaKnown RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 MMP11P24347 488 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 MAGEA6P43360 314 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 OR1D4P47884 311 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 SOX8P57073 446 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 VSX2P58304 361 aaPredicted RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 YBX1P67809 324 aaKnown RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 DHX34Q14147 1143 aaKnown RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 FASTKQ14296 549 aaKnown RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 GBX1Q14549 363 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 MYBPC3Q14896 1274 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 NKG7Q16617 165 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 CYP2A13Q16696 494 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 KLHL38Q2WGJ6 581 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 ANKRD20A4Q4UJ75 823 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ACSBG2Q5FVE4 666 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 VWA5B1Q5TIE3 1220 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ANKRD22Q5VYY1 191 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ARMC3Q5W041 872 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 SLC6A19Q695T7 634 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 TTC27Q6P3X3 843 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 CILP2Q8IUL8 1156 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 TTC29Q8NA56 475 aaPredicted RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 Q8NA96 180 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 OR2L3Q8NG85 312 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 OR9A1PQ8NGU1 263 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 FKBP10Q96AY3 582 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 MS4A14Q96JA4 679 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ZNF285Q96NJ3 590 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 ACAT2Q9BWD1 397 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ZNF552Q9H707 407 aaPredicted RBP8.53□□□□□ -1.04
COPB1-211ENST00000534234 WDR54Q9H977 334 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 IL1RAPL1Q9NZN1 696 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 MAP10Q9P2G4 905 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 VPS9D1Q9Y2B5 631 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 JRKLQ9Y4A0 524 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 KLK4Q9Y5K2 254 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 FLNCQ14315 2725 aa8.53□□□□□ -1.04
COPB1-211ENST00000534234 LOC105369274A0A096LPK9 316 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 LOC102723532A0A0G2JNH3 316 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 FAM237BA0A1B0GVD1 139 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 A0A1W2PPV9 198 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 HYKKA2RU49 373 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 CTAGE9A4FU28 777 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 FITM1A5D6W6 292 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 GOLGA8MH3BSY2 632 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 EIF2S1P05198 315 aaKnown RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 ATP5DP30049 168 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 CMPK1P30085 196 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 COILP38432 576 aaPredicted RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 THOC5Q13769 683 aaKnown RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 PRR30Q53SZ7 412 aaPredicted RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 FHL5Q5TD97 284 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 FRMPD2BQ6IN97 320 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 FBXO42Q6P3S6 717 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 IGFL3Q6UXB1 125 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 OR4N4Q8N0Y3 316 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 RASGEF1CQ8N431 466 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 METTL27Q8N6F8 245 aaPredicted RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 MCUQ8NE86 351 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 SMPDL3AQ92484 453 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 PBKQ96KB5 322 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 SPSB2Q99619 263 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 DPH7Q9BTV6 452 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 SLC26A1Q9H2B4 701 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 INTS10Q9NVR2 710 aaKnown RBP8.52□□□□□ -1.04
COPB1-211ENST00000534234 SPATA7Q9P0W8 599 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 CDC23Q9UJX2 597 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 MAU2Q9Y6X3 613 aa8.52□□□□□ -1.04
COPB1-211ENST00000534234 BLACEA4D250 179 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 OR2A25A4D2G3 310 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 ARHGEF33A8MVX0 844 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 TCP11X1B4DZS4 312 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 NRP2O60462 931 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 PSIP1O75475 530 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 USP1O94782 785 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 IPO13O94829 963 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 AGFG2O95081 481 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 CATP04040 527 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 GP1BBP13224 206 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 ITGA3P26006 1051 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 CLCN7P51798 805 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 AIMP2Q13155 320 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 CTBP1Q13363 440 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 TSTA3Q13630 321 aaPredicted RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 EIF2S3LQ2VIR3 472 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms