RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TTC29Q8NA56 475 aaPredicted RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 OR9A1PQ8NGU1 263 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 CALML6Q8TD86 181 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 ADAMTS17Q8TE56 1095 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 DENND1AQ8TEH3 1009 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 DLG3Q92796 817 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SIGLEC10Q96LC7 697 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SLC30A3Q99726 388 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 DHRS4Q9BTZ2 278 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 FAM114A2Q9NRY5 505 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 IARS2Q9NSE4 1012 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SPATA7Q9P0W8 599 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 G3BP2Q9UN86 482 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 FAM169AQ9Y6X4 670 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SCN3AQ9NY46 2000 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SCN2AQ99250 2005 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 PEX12O00623 359 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 CES2O00748 559 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 DNALI1O14645 258 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 PRICKLE3O43900 615 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 NRP2O60462 931 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 CTSVO60911 334 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 KLF7O75840 302 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 MATN4O95460 622 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 PGAM1P18669 254 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 ATP5DP30049 168 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 CMPK1P30085 196 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 CLCN7P51798 805 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 ARSFP54793 590 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 RRADP55042 308 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 MLLT10P55197 1068 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 ADARP55265 1226 aaKnown RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 GNG11P61952 73 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 YBX1P67809 324 aaKnown RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 DHX9Q08211 1270 aaKnown RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 PTK6Q13882 451 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 GBX1Q14549 363 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 GRM7Q14831 915 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 BBS9Q3SYG4 887 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 HP1BP3Q5SSJ5 553 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 ZNF549Q6P9A3 640 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 MRGPREQ86SM8 312 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 KCNMB4Q86W47 210 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 TMEM151BQ8IW70 566 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 PPFIBP2Q8ND30 876 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 OR2L3Q8NG85 312 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 OR2A1Q8NGT9 310 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 GIMAP7Q8NHV1 300 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-225ENST00000533704 INPP5DQ92835 1189 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 ZUFSPQ96AP4 578 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 CFAP36Q96G28 342 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 PKP4Q99569 1192 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 NDNQ99608 321 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 GPR21Q99679 349 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 FAM167BQ9BTA0 163 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 DPH7Q9BTV6 452 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 CUTCQ9NTM9 273 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 FBXO5Q9UKT4 447 aa10.01□□□□□ -0.81
CAPN1-225ENST00000533704 A0A1B0GX78 115 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 A0A1W2PPV9 198 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 TARM1B6A8C7 271 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 DSCR3O14972 297 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 CNOT3O75175 753 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 VPS26AO75436 327 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 PSIP1O75475 530 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 HAUS5O94927 633 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 FKBP9O95302 570 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 ERVK-10P10266 1014 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 MAGEA3P43357 314 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 OR1D4P47884 311 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 PNLIPRP1P54315 467 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 SSPNQ14714 243 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 CRYMQ14894 314 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 CYP2A13Q16696 494 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 TCTE1Q5JU00 501 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 WASHC2DQ5SRD0 308 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 THEMIS2Q5TEJ8 643 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 FRMPD2BQ6IN97 320 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 SHISA6Q6ZSJ9 500 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 MED25Q71SY5 747 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 ADCK2Q7Z695 626 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 PCGF5Q86SE9 256 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 CPNE9Q8IYJ1 553 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 DTWD1Q8N5C7 304 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 TMEM102Q8N9M5 508 aaPredicted RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 FDCSPQ8NFU4 85 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 OR2Y1Q8NGV0 311 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 HMGCLL1Q8TB92 370 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 SMPDL3AQ92484 453 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 KCNJ9Q92806 393 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 MFRPQ9BY79 579 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 SLC6A20Q9NP91 592 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 MRPS30Q9NP92 439 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 PPANQ9NQ55 473 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 LUZP4Q9P127 313 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 STOX2Q9P2F5 926 aaPredicted RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 ZC3H7BQ9UGR2 993 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 TAC3Q9UHF0 121 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms