RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 IYDQ6PHW0 289 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 TMEM207Q6UWW9 146 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CYHR1Q6ZMK1 362 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 KIAA0408Q6ZU52 694 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 SDCCAG8Q86SQ7 713 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 AMZ2Q86W34 360 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 ZNF761Q86XN6 746 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 TRAPPC5Q8IUR0 188 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 RASGRP3Q8IV61 690 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CISD2Q8N5K1 135 aaKnown RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 FDCSPQ8NFU4 85 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CALML6Q8TD86 181 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 SLC37A2Q8TED4 501 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 NCSTNQ92542 709 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 DCUN1D1Q96GG9 259 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 TTC25Q96NG3 672 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 FAM167BQ9BTA0 163 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 AARSD1Q9BTE6 412 aaKnown RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 TRIM8Q9BZR9 551 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 TSPYL1Q9H0U9 437 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 OR52A5Q9H2C5 316 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 B3GNT3Q9Y2A9 372 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 DNAJC16Q9Y2G8 782 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 MTO1Q9Y2Z2 717 aaKnown RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 ACANP16112 2415 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 NCOA6Q14686 2063 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ANKRD12Q6UB98 2062 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 TRBV23OR9-2A0A075B6M9 112 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 CFAP99D6REC4 459 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 RIPK2O43353 540 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 KCNJ13O60928 360 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SLCO2B1O94956 709 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ACSL3O95573 720 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 C9P02748 559 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ESR1P03372 595 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 TPBGLP0DKB5 382 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 RALBP11234 206 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SPTBP11277 2137 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 RPL10P27635 214 aaKnown RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SLC19A1P41440 591 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ACTR1BP42025 376 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 PPM1FP49593 454 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ACTR1AP61163 376 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 IL10RAQ13651 578 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 GTF2H3Q13889 308 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SLC29A2Q14542 456 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SLMAPQ14BN4 828 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 AGAP9Q5VTM2 703 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 TRMT10CQ7L0Y3 403 aaKnown RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SLC26A11Q86WA9 606 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 LRRC6Q86X45 466 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 PLXDC1Q8IUK5 500 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 CFAP206Q8IYR0 622 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 UHMK1Q8TAS1 419 aaKnown RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.56□□□□□ -0.723e-6■■■□□ 18.4
NEDD8-204ENST00000526430 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 NDNQ99608 321 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 NRTNQ99748 197 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 OLFM1Q99784 485 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 DHRS4Q9BTZ2 278 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ZCCHC2Q9C0B9 1178 aaKnown RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 ACSS3Q9H6R3 686 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 COG4Q9H9E3 785 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 VPS37BQ9H9H4 285 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 SARS2Q9NP81 518 aaKnown RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 CHST11Q9NPF2 352 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 GPR83Q9NYM4 423 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 COPG2Q9UBF2 871 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 LNPEPQ9UIQ6 1025 aa10.56□□□□□ -0.72
NEDD8-204ENST00000526430 COPG1Q9Y678 874 aaKnown RBP10.56□□□□□ -0.72
NEDD8-204ENST00000526430 UBA6A0AVT1 1052 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-204ENST00000526430 SPAG6O75602 509 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 ABHD2P08910 425 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 OR56A5P0C7T3 313 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 F3P13726 295 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 CD1EP15812 388 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 CD9P21926 228 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 PBLDP30039 288 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-204ENST00000526430 PREPP48147 710 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 UBE2IP63279 158 aaKnown RBP10.55□□□□□ -0.72
NEDD8-204ENST00000526430 HHEXQ03014 270 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 INSCQ1MX18 579 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 ACSBG2Q5FVE4 666 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 RNF187Q5TA31 235 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-204ENST00000526430 CYB5D1Q6P9G0 228 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 STRA8Q7Z7C7 330 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 CEP97Q8IW35 865 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 PPM1NQ8N819 430 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 CD200R1Q8TD46 325 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 ADAMTS17Q8TE56 1095 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 SH3KBP1Q96B97 665 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 RMDN2Q96LZ7 410 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 OR6C1Q96RD1 312 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 TTC1Q99614 292 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 RBBP8Q99708 897 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 STN1Q9H668 368 aaKnown RBP10.55□□□□□ -0.72
NEDD8-204ENST00000526430 PPANQ9NQ55 473 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms