RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TARM1B6A8C7 271 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 PSIP1O75475 530 aaKnown RBP17.8■□□□□ 0.44
CAPN1-203ENST00000525013 KLF7O75840 302 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-203ENST00000525013 CD63P08962 238 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 PGAM1P18669 254 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 MCM3P25205 808 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 FOLR3P41439 243 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 ARSFP54793 590 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 MPP1Q00013 466 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 CUL1Q13616 776 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 ATP1A4Q13733 1029 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 PTK6Q13882 451 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 FASTKQ14296 549 aaKnown RBP17.8■□□□□ 0.44
CAPN1-203ENST00000525013 CYP2A13Q16696 494 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.8■□□□□ 0.44
CAPN1-203ENST00000525013 TCTE1Q5JU00 501 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 ZNF549Q6P9A3 640 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 PCGF5Q86SE9 256 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 KCNMB4Q86W47 210 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 LMNTD2Q8IXW0 634 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 FAM167BQ9BTA0 163 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 IARS2Q9NSE4 1012 aaKnown RBP17.8■□□□□ 0.44
CAPN1-203ENST00000525013 PCYOX1Q9UHG3 505 aa17.8■□□□□ 0.44
CAPN1-203ENST00000525013 UBR5O95071 2799 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-203ENST00000525013 A6NL46 340 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 DNALI1O14645 258 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-203ENST00000525013 CTSVO60911 334 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 BANF1O75531 89 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 HAUS5O94927 633 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 PDGFAP04085 211 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 CMPK1P30085 196 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 RPA3P35244 121 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-203ENST00000525013 RRADP55042 308 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 VSX2P58304 361 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-203ENST00000525013 SSPNQ14714 243 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 GRM7Q14831 915 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 SUSD1Q6UWL2 747 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 NEK10Q6ZWH5 1172 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 SPNS2Q8IVW8 549 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 KLHL7Q8IXQ5 586 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 TTC29Q8NA56 475 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-203ENST00000525013 OR2A1Q8NGT9 310 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 GIMAP7Q8NHV1 300 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 SMPDL3AQ92484 453 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 KCNJ9Q92806 393 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 INPP5DQ92835 1189 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 GPR21Q99679 349 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 CUTCQ9NTM9 273 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 KLHL42Q9P2K6 505 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 G3BP2Q9UN86 482 aaKnown RBP17.79■□□□□ 0.44
CAPN1-203ENST00000525013 COMMD10Q9Y6G5 202 aa17.79■□□□□ 0.44
CAPN1-203ENST00000525013 A0A0J9YVX5 310 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 A0A1B0GX78 115 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 A0A1W2PPV9 198 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 MYO1CO00159 1063 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 SYF2O95926 243 aaKnown RBP17.78■□□□□ 0.44
CAPN1-203ENST00000525013 ERVK-10P10266 1014 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 FOXL2P58012 376 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 DHX9Q08211 1270 aaKnown RBP17.78■□□□□ 0.44
CAPN1-203ENST00000525013 CRYMQ14894 314 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 BBS9Q3SYG4 887 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 WASHC2DQ5SRD0 308 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 MED25Q71SY5 747 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 MRGPREQ86SM8 312 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 TMEM102Q8N9M5 508 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-203ENST00000525013 OR2Y1Q8NGV0 311 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 GABPB2Q8TAK5 448 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-203ENST00000525013 SLCO2A1Q92959 643 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 PKP4Q99569 1192 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 EBNA1BP2Q99848 306 aaKnown RBP17.78■□□□□ 0.44
CAPN1-203ENST00000525013 DPH7Q9BTV6 452 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 ABCF3Q9NUQ8 709 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 MED16Q9Y2X0 877 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 DHRS7Q9Y394 339 aa17.78■□□□□ 0.44
CAPN1-203ENST00000525013 PCDHGA9Q9Y5G4 932 aaKnown RBP17.78■□□□□ 0.44
CAPN1-203ENST00000525013 PEX12O00623 359 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 DSCR3O14972 297 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 NRP2O60462 931 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 SRPX2O60687 465 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 VPS26AO75436 327 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 TTC4O95801 387 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 EIF2S1P05198 315 aaKnown RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 PIM1P11309 404 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 ENO3P13929 434 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 HSD17B2P37059 387 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 PNLIPRP1P54315 467 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 YBX1P67809 324 aaKnown RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 ARHGAP19Q14CB8 494 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 NAA25Q14CX7 972 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 IGFBP7Q16270 282 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 FAM214AQ32MH5 1076 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 MSS51Q4VC12 460 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 HP1BP3Q5SSJ5 553 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 YOD1Q5VVQ6 348 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 FRMPD2BQ6IN97 320 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 CPNE9Q8IYJ1 553 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 METTL27Q8N6F8 245 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-203ENST00000525013 PTERQ96BW5 349 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 IP6K3Q96PC2 410 aa17.77■□□□□ 0.44
CAPN1-203ENST00000525013 NAPGQ99747 312 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms