RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TRIM7Q9C029 511 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 MIS12Q9H081 205 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 THAP2Q9H0W7 228 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 LHX5Q9H2C1 402 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 NHEJ1Q9H9Q4 299 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 WDR6Q9NNW5 1121 aaKnown RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ARL15Q9NXU5 204 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 IL36RNQ9UBH0 155 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 CCL26Q9Y258 94 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 DAAM1Q9Y4D1 1078 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RAI2Q9Y5P3 530 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 F5P12259 2224 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SCN8AQ9UQD0 1980 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PLXND1Q9Y4D7 1925 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF840PA6NDX5 716 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ANTXRLA6NF34 631 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SHISA7A6NL88 538 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 USP27XA6NNY8 438 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 GOLGA8SH3BPF8 625 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 COCHO43405 550 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 MED7O43513 233 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 RTN2O75298 545 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 RTN3O95197 1032 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ZBTB11O95625 1053 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 IGLV3-25P01717 112 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 HLA-DQA2P01906 255 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 HNRNPA1P09651 372 aaKnown RBP eCLIP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PEPDP12955 493 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 HOXB8P17481 243 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 HOXB9P17482 250 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ABCB4P21439 1286 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TNFAIP3P21580 790 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ANXA13P27216 316 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 YWHAQP27348 245 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 RFC1P35251 1148 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 AVPR1AP37288 418 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TUFMP49411 452 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PDLIM4P50479 330 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 GALCP54803 685 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 YWHAGP61981 247 aaKnown RBP eCLIP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 RPL10AP62906 217 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 MRPS5P82675 430 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 HNF4GQ14541 408 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF77Q15935 545 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SLC18A3Q16572 532 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 C15orf59Q2T9L4 293 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 CCDC122Q5T0U0 273 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TXNRD3NBQ6F5E7 133 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TANGO2Q6ICL3 276 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 OR6B2Q6IFH4 312 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PLEKHA7Q6IQ23 1121 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM71Q6P5X7 295 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ALKBH5Q6P6C2 394 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SLC30A9Q6PML9 568 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 VITQ6UXI7 678 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 CYP26C1Q6V0L0 522 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 CYP4V2Q6ZWL3 525 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TAC4Q86UU9 113 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM200AQ86VY9 491 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ERICH1Q86X53 443 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PHF13Q86YI8 300 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 DEFB106AQ8N104 65 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SCML4Q8N228 414 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 MAB21L3Q8N8X9 362 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM35BQ8NCS4 154 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 OR14A16Q8NHC5 309 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 FAM110DQ8TAY7 271 aaPredicted RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM163Q8TC26 289 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 FGF13Q92913 245 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 FBXO32Q969P5 355 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 NT5C3BQ969T7 300 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF653Q96CK0 615 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 CFAP57Q96MR6 1250 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PANX2Q96RD6 677 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 PRPF18Q99633 342 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SORBS1Q9BX66 1292 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 C1QTNF1Q9BXJ1 281 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 GOLPH3Q9H4A6 298 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 EPHX3Q9H6B9 360 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 LRRC4Q9HBW1 653 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 CNGB3Q9NQW8 809 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ASAH2Q9NR71 780 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 GKN1Q9NS71 199 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 LIN7CQ9NUP9 197 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SEPT11Q9NVA2 429 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TRIM10Q9UDY6 481 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 XPO7Q9UIA9 1087 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 CD207Q9UJ71 328 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SLC39A10Q9ULF5 831 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 KIAA1257Q9ULG3 409 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 NAALADL1Q9UQQ1 740 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 SCML2Q9UQR0 700 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 RAP2CQ9Y3L5 183 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ASB3Q9Y575 518 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 ZZEF1O43149 2961 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 HECTD1Q9ULT8 2610 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TEX15Q9BXT5 2789 aa2.98□□□□□ -1.93
CSDE1-208ENST00000524652 TNRC6BQ9UPQ9 1833 aaKnown RBP2.98□□□□□ -1.93
CSDE1-208ENST00000524652 NUMA1Q14980 2115 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms