RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 GALNT11Q8NCW6 608 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 OR2L3Q8NG85 312 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 NAP1L3Q99457 506 aaPredicted RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 TRIM56Q9BRZ2 755 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 XAB2Q9HCS7 855 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 FAM114A2Q9NRY5 505 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 SLC22A11Q9NSA0 550 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 INTS10Q9NVR2 710 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 IL1RAPL1Q9NZN1 696 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 MAP10Q9P2G4 905 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 FAM237BA0A1B0GVD1 139 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 MAGEB16A2A368 324 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 SDR42E2A6NKP2 422 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 GOLGA8MH3BSY2 632 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 SRPX2O60687 465 aaPredicted RBP15.16■□□□□ 0.02
CLN8-205ENST00000520991 CTSVO60911 334 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 USP1O94782 785 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 ALBP02768 609 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 CATP04040 527 aaKnown RBP15.16■□□□□ 0.02
CLN8-205ENST00000520991 MLNP12872 115 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 ITGAXP20702 1163 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 CMPK1P30085 196 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 TSTA3Q13630 321 aaPredicted RBP15.16■□□□□ 0.02
CLN8-205ENST00000520991 GBX1Q14549 363 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 MYBPC3Q14896 1274 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 NAA25Q14CX7 972 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 FAM214AQ32MH5 1076 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 TTLL9Q3SXZ7 439 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 ANKRD20A4Q4UJ75 823 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 ACSBG2Q5FVE4 666 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 CENPUQ71F23 418 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 OVCH1Q7RTY7 1134 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 METTL27Q8N6F8 245 aaPredicted RBP15.16■□□□□ 0.02
CLN8-205ENST00000520991 RBMXL3Q8N7X1 1067 aaKnown RBP15.16■□□□□ 0.02
CLN8-205ENST00000520991 OR9A1PQ8NGU1 263 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 PNPLA2Q96AD5 504 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 ZNF285Q96NJ3 590 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 ACAT2Q9BWD1 397 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 CCDC68Q9H2F9 335 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 WDR54Q9H977 334 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 C5AR2Q9P296 337 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 GALPQ9UBC7 116 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 CDC23Q9UJX2 597 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 MAP4K5Q9Y4K4 846 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 KLK4Q9Y5K2 254 aa15.16■□□□□ 0.02
CLN8-205ENST00000520991 A0A0J9YVX5 310 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 A0A1W2PPV9 198 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 CLEC18AA5D8T8 446 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 ARHGEF33A8MVX0 844 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 AGPSO00116 658 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 PGRMC1O00264 195 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 ERVK-10P10266 1014 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 GNLYP22749 145 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 RPA3P35244 121 aaPredicted RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 COILP38432 576 aaPredicted RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 UQCRFS1P47985 274 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 FASTKQ14296 549 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 INPP5JQ15735 1006 aaPredicted RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 KLHL38Q2WGJ6 581 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 WASHC2DQ5SRD0 308 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 FRMPD2BQ6IN97 320 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 CCDC137Q6PK04 289 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 CLEC18BQ6UXF7 455 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 COX15Q7KZN9 410 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 CLEC18CQ8NCF0 446 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 MCUQ8NE86 351 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 OR2A1Q8NGT9 310 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 SERPINB12Q96P63 405 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 SOX17Q9H6I2 414 aaPredicted RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 ATP13A2Q9NQ11 1180 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 CTSFQ9UBX1 484 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 ZC3H7BQ9UGR2 993 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 NXT1Q9UKK6 140 aaKnown RBP15.15■□□□□ 0.02
CLN8-205ENST00000520991 MAD1L1Q9Y6D9 718 aa15.15■□□□□ 0.02
CLN8-205ENST00000520991 DOPEY2Q9Y3R5 2298 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 CCDC88CQ9P219 2028 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 LRRK2Q5S007 2527 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 HYKKA2RU49 373 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 FITM1A5D6W6 292 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 ZNF839A8K0R7 811 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 MASP2O00187 686 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 NRP2O60462 931 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 PSIP1O75475 530 aaKnown RBP15.14■□□□□ 0.01
CLN8-205ENST00000520991 IPO13O94829 963 aaKnown RBP15.14■□□□□ 0.01
CLN8-205ENST00000520991 ONECUT2O95948 504 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 F7P08709 466 aaPredicted RBP15.14■□□□□ 0.01
CLN8-205ENST00000520991 MMP11P24347 488 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 VARSP26640 1264 aaKnown RBP15.14■□□□□ 0.01
CLN8-205ENST00000520991 OR1D4P47884 311 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 AIMP2Q13155 320 aaKnown RBP15.14■□□□□ 0.01
CLN8-205ENST00000520991 NKG7Q16617 165 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 CYP1B1Q16678 543 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 PRR30Q53SZ7 412 aaPredicted RBP15.14■□□□□ 0.01
CLN8-205ENST00000520991 SUSD1Q6UWL2 747 aa15.14■□□□□ 0.01
CLN8-205ENST00000520991 SHISA6Q6ZSJ9 500 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms