RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 FDFT1P37268 417 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 CARSP49589 748 aaKnown RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 VPS41P49754 854 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 RAB28P51157 221 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 EIF3BP55884 814 aaKnown RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 KIF5AQ12840 1032 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 NKG7Q16617 165 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 HIF1AQ16665 826 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 EIF2S3LQ2VIR3 472 aaKnown RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 ALKBH2Q6NS38 261 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 KIRREL2Q6UWL6 708 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 PPP1R21Q6ZMI0 780 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 CAND1Q86VP6 1230 aaKnown RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 LURAP1LQ8IV03 231 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 MCATQ8IVS2 390 aaKnown RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 DCUN1D3Q8IWE4 304 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 LRRC56Q8IYG6 542 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 PPFIBP2Q8ND30 876 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 OR2A1Q8NGT9 310 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 OR2Y1Q8NGV0 311 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 OR6P1Q8NGX9 317 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 HEXDCQ8WVB3 486 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 DLG3Q92796 817 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 SGSM3Q96HU1 749 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 MS4A14Q96JA4 679 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 DMRTB1Q96MA1 342 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 CHRNA10Q9GZZ6 450 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 LZTFL1Q9NQ48 299 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 CATSPERZQ9NTU4 200 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 GPR83Q9NYM4 423 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 OR6C2Q9NZP2 312 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 ERRFI1Q9UJM3 462 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-202ENST00000517403 FBXL4Q9UKA2 621 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 ZNF148Q9UQR1 794 aa8.27□□□□□ -1.09
PABPC1-202ENST00000517403 ZCWPW2A0A1B0GU75 182 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 OR2A25A4D2G3 310 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 FITM1A5D6W6 292 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PRMT5O14744 637 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 FANCGO15287 622 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CD3EAPO15446 510 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 ONECUT2O95948 504 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 FGGP02679 453 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 KLK3P07288 261 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 OR56A5P0C7T3 313 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 RPS3P23396 243 aaKnown RBP eCLIP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 DNAJA1P31689 397 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 BASP1P80723 227 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CUL1Q13616 776 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 KIR2DS3Q14952 304 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 SYT16Q17RD7 645 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PRTGQ2VWP7 1150 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 DNAJC21Q5F1R6 531 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 SEL1L2Q5TEA6 688 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 ZNF787Q6DD87 383 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 FIGLAQ6QHK4 219 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 SUSD1Q6UWL2 747 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 MBOAT1Q6ZNC8 495 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 TTLL10Q6ZVT0 673 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 RNF44Q7L0R7 432 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PRSS41Q7RTY9 318 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CTAGE6Q86UF2 777 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PLD3Q8IV08 490 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 DENND6AQ8IWF6 608 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PRSS58Q8IYP2 241 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 SYCE1Q8N0S2 351 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CISD2Q8N5K1 135 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 AMER3Q8N944 861 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 GALNT11Q8NCW6 608 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 OR2L3Q8NG85 312 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 C8orf44Q96CB5 159 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CCDC138Q96M89 665 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 BARD1Q99728 777 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 KIFC1Q9BW19 673 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CARD6Q9BX69 1037 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 LUC7LQ9NQ29 371 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 EIF2B3Q9NR50 452 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CUTCQ9NTM9 273 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 CUEDC1Q9NWM3 386 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 IFT80Q9P2H3 777 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PLEKHB1Q9UF11 243 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 IKZF3Q9UKT9 509 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 PLCL2Q9UPR0 1127 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 SPTAN1Q13813 2472 aaKnown RBP8.26□□□□□ -1.09
PABPC1-202ENST00000517403 FBN2P35556 2912 aa8.26□□□□□ -1.09
PABPC1-202ENST00000517403 A0A0J9YVX5 310 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 A0A1B0GX78 115 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 GOLGA6L9A6NEM1 432 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 OR2W5A6NFC9 320 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 VSTM2BA6NLU5 285 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 ERI2A8K979 691 aaKnown RBP8.25□□□□□ -1.09
PABPC1-202ENST00000517403 FOXS1O43638 330 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 JRKO75564 520 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 KLHL18O94889 574 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 VAPBO95292 243 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 MATN4O95460 622 aa8.25□□□□□ -1.09
PABPC1-202ENST00000517403 CBX6O95503 412 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms