RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SLC22A11Q9NSA0 550 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 KLHL42Q9P2K6 505 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 TSR3Q9UJK0 312 aaKnown RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 PTRH2Q9Y3E5 179 aaKnown RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 FLNBO75369 2602 aaKnown RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 OR2A25A4D2G3 310 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 DSCR3O14972 297 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 ZSCAN12O43309 604 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 NRP2O60462 931 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 SORBS2O94875 1100 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 CATP04040 527 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 MCM3P25205 808 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 OTX2P32243 289 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FOXL2P58012 376 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 CTBP1Q13363 440 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 THOC5Q13769 683 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FASTKQ14296 549 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 SSPNQ14714 243 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 GRM7Q14831 915 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 ARHGAP19Q14CB8 494 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 NAA25Q14CX7 972 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 LONRF1Q17RB8 773 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 KLHL38Q2WGJ6 581 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 RNASEH2BQ5TBB1 312 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FRMPD2BQ6IN97 320 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF549Q6P9A3 640 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 TTLL10Q6ZVT0 673 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 NEK10Q6ZWH5 1172 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 COX15Q7KZN9 410 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 HPS6Q86YV9 775 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 TTC29Q8NA56 475 aaPredicted RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FBXO15Q8NCQ5 510 aaPredicted RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 OR9A1PQ8NGU1 263 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 SIGLEC10Q96LC7 697 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 SLC26A1Q9H2B4 701 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 SLC6A20Q9NP91 592 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FBXO6Q9NRD1 293 aaPredicted RBP10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FAM114A2Q9NRY5 505 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 CUTCQ9NTM9 273 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 ANKMY1Q9P2S6 941 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 PLAAQ9Y263 795 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF451Q9Y4E5 1061 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 FAM169AQ9Y6X4 670 aa10.02□□□□□ -0.81
HMGXB3-205ENST00000514469 CTAGE9A4FU28 777 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 CLEC18AA5D8T8 446 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF185O15231 689 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 SRPX2O60687 465 aaPredicted RBP10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 IGHEP01854 428 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 ALBP02768 609 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 PGAM1P18669 254 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 MLLT10P55197 1068 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 PTK6Q13882 451 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 CRYMQ14894 314 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 TTLL9Q3SXZ7 439 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 NADK2Q4G0N4 442 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 CLEC18BQ6UXF7 455 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 PPP1R32Q7Z5V6 425 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 TMEM151BQ8IW70 566 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 CLEC18CQ8NCF0 446 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 CD200R1Q8TD46 325 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 CALML6Q8TD86 181 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 SMPDL3AQ92484 453 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 SLCO2A1Q92959 643 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 PTERQ96BW5 349 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 FER1L6-AS2Q96M78 137 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 SPSB2Q99619 263 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 SMAD5Q99717 465 aaKnown RBP10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 FAM167BQ9BTA0 163 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 WDR54Q9H977 334 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 C20orf96Q9NUD7 363 aaPredicted RBP10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 GPR83Q9NYM4 423 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 G3BP2Q9UN86 482 aaKnown RBP10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 MAD1L1Q9Y6D9 718 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 COMMD10Q9Y6G5 202 aa10.01□□□□□ -0.81
HMGXB3-205ENST00000514469 FER1L5A0AVI2 2057 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 COL12A1Q99715 3063 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 IGKV1-8A0A0C4DH67 115 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 A0A0J9YVX5 310 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 ZNF839A8K0R7 811 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 EIF3FO00303 357 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 DNALI1O14645 258 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 DPM1O60762 260 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 MED26O95402 600 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 SLC16A8O95907 504 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 MPC1LP0DKB6 136 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 PIM1P11309 404 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 ENO3P13929 434 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 ALAS2P22557 587 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 CMPK1P30085 196 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 RPA3P35244 121 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 HSD17B2P37059 387 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 PNLIPRP1P54315 467 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 VSX2P58304 361 aaPredicted RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 YBX1P67809 324 aaKnown RBP10□□□□□ -0.81
HMGXB3-205ENST00000514469 MPP1Q00013 466 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 CUL1Q13616 776 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 PPP1R7Q15435 360 aa10□□□□□ -0.81
HMGXB3-205ENST00000514469 NKG7Q16617 165 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms